More than 300 homologs were found in PanDaTox collection
for query gene BBta_6545 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6545  ABC transporter permease  100 
 
 
269 aa  531  1e-150  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  74.05 
 
 
273 aa  405  1.0000000000000001e-112  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  70.99 
 
 
283 aa  380  1e-104  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  74.71 
 
 
288 aa  365  1e-100  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  43.87 
 
 
274 aa  203  3e-51  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  39.85 
 
 
271 aa  196  2.0000000000000003e-49  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  42.26 
 
 
277 aa  192  7e-48  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  41.35 
 
 
277 aa  189  4e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
273 aa  189  5.999999999999999e-47  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
273 aa  189  5.999999999999999e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  38.72 
 
 
273 aa  188  1e-46  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  40 
 
 
273 aa  187  2e-46  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  42.15 
 
 
269 aa  182  4.0000000000000006e-45  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  41.76 
 
 
269 aa  181  9.000000000000001e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  40.23 
 
 
273 aa  181  9.000000000000001e-45  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  40.23 
 
 
273 aa  181  9.000000000000001e-45  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  41.38 
 
 
269 aa  181  2e-44  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  42.13 
 
 
274 aa  179  2.9999999999999997e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  42.13 
 
 
274 aa  179  5.999999999999999e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
253 aa  177  1e-43  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  41.23 
 
 
285 aa  176  4e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  44.17 
 
 
261 aa  174  9.999999999999999e-43  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  40.46 
 
 
286 aa  173  2.9999999999999996e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  38.15 
 
 
302 aa  171  7.999999999999999e-42  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_009439  Pmen_4330  binding-protein-dependent transport systems inner membrane component  43.39 
 
 
276 aa  171  1e-41  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.936191 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  37.55 
 
 
277 aa  170  2e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  38.87 
 
 
259 aa  169  4e-41  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  45.73 
 
 
294 aa  169  5e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  39.68 
 
 
268 aa  168  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  44.55 
 
 
291 aa  167  2e-40  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  44.55 
 
 
291 aa  167  2e-40  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
265 aa  166  2.9999999999999998e-40  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  46.84 
 
 
283 aa  166  5e-40  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
314 aa  166  5e-40  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  37.4 
 
 
279 aa  165  5.9999999999999996e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  44 
 
 
274 aa  165  8e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  42.74 
 
 
266 aa  165  9e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  39.6 
 
 
282 aa  163  2.0000000000000002e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  39.27 
 
 
272 aa  163  2.0000000000000002e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  36.55 
 
 
286 aa  163  2.0000000000000002e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  36.89 
 
 
261 aa  163  3e-39  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
254 aa  163  3e-39  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  36.29 
 
 
278 aa  162  4.0000000000000004e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  46.56 
 
 
287 aa  162  4.0000000000000004e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  38.25 
 
 
273 aa  162  4.0000000000000004e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  46.56 
 
 
291 aa  162  4.0000000000000004e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  42.79 
 
 
260 aa  161  1e-38  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
253 aa  161  1e-38  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  41.54 
 
 
275 aa  160  2e-38  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_008553  Mthe_0521  binding-protein-dependent transport systems inner membrane component  41 
 
 
239 aa  160  2e-38  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  40.3 
 
 
269 aa  160  2e-38  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  39 
 
 
290 aa  160  2e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
253 aa  160  3e-38  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  35.74 
 
 
279 aa  160  3e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
275 aa  160  3e-38  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  38.4 
 
 
282 aa  159  4e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_014165  Tbis_1380  binding-protein-dependent transporter inner membrane component  36.08 
 
 
277 aa  159  4e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.153307 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  36.55 
 
 
279 aa  159  6e-38  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  35.55 
 
 
253 aa  159  6e-38  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  38.76 
 
 
258 aa  158  7e-38  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
293 aa  158  9e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  37.6 
 
 
252 aa  158  1e-37  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  37.26 
 
 
264 aa  157  2e-37  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5468  ABC transporter membrane spanning protein (aliphatic sulphonate)  41.06 
 
 
284 aa  157  2e-37  Agrobacterium vitis S4  Bacteria  normal  0.165676  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  37.26 
 
 
264 aa  157  2e-37  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
255 aa  157  2e-37  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
319 aa  155  5.0000000000000005e-37  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
264 aa  155  6e-37  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
258 aa  155  6e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4139  binding-protein dependent transport system inner membrane protein  37.75 
 
 
275 aa  154  1e-36  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000000314222  normal  0.0106036 
 
 
-
 
NC_009720  Xaut_3464  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
294 aa  154  2e-36  Xanthobacter autotrophicus Py2  Bacteria  normal  0.136656  normal 
 
 
-
 
NC_010086  Bmul_4035  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
287 aa  153  2.9999999999999998e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0678072 
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  39.59 
 
 
262 aa  153  2.9999999999999998e-36  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
264 aa  153  2.9999999999999998e-36  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  44.55 
 
 
291 aa  153  2.9999999999999998e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
281 aa  152  4e-36  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  31.23 
 
 
254 aa  152  5e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
283 aa  152  8e-36  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
264 aa  151  8.999999999999999e-36  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  35.27 
 
 
250 aa  151  1e-35  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_010622  Bphy_1648  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
283 aa  151  1e-35  Burkholderia phymatum STM815  Bacteria  normal  0.189471  normal  0.0804385 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
270 aa  151  1e-35  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
270 aa  151  1e-35  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
270 aa  151  1e-35  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
270 aa  151  1e-35  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  33.19 
 
 
283 aa  150  2e-35  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_011894  Mnod_5516  binding-protein-dependent transport systems inner membrane component  39.27 
 
 
262 aa  150  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  34.71 
 
 
279 aa  150  2e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  37.65 
 
 
280 aa  150  2e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_010510  Mrad2831_6162  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
262 aa  150  2e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.577279 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  39.13 
 
 
270 aa  150  2e-35  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  33.19 
 
 
283 aa  150  2e-35  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  33.19 
 
 
253 aa  149  3e-35  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  33.19 
 
 
253 aa  150  3e-35  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  38.06 
 
 
270 aa  150  3e-35  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  33.19 
 
 
283 aa  150  3e-35  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  33.19 
 
 
285 aa  150  3e-35  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  36.84 
 
 
280 aa  149  4e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  36.33 
 
 
269 aa  149  5e-35  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
272 aa  149  6e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
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