Gene Cyan8802_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4458 
Symbol 
ID8393810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4608339 
End bp4609172 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content37% 
IMG OID644982365 
Productnitrate ABC transporter, inner membrane subunit 
Protein accessionYP_003140076 
Protein GI257062188 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID[TIGR01183] nitrate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.698055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.534513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTA ATCTCAACAA ATCCTTGAGG AAACCTAATT TTATTGTTTC CCTCATTAAA 
AATCCCCCTA GAAAGTTATT AGCTCCTGTT TGTGCTATTC TCTTTATTCT AGTCGTTTGG
CAAATTTTAT GTAACAGTCC AGAGGCTAAT TTACCGAGTC CTCTTAAAAC TTTTCAAGAG
ACTTCTACAC TAATTTTTAA TCCTTTTTTT GATAATGGAG GCACAGATAA AGGACTATTT
TGGCAGATAA CTGCAAGTTT ACAACGGGTA GCGATCGGGT ATAGTCTAGC AGCCATTGTT
GGAATTGCTT TAGGTATCTT AATTGGGTCT AATTCCTTTA TTTATGATGC CGTTGATCCT
ATTTTTCAAG TCTTGCGAAC CGTTCCCCCC TTAGCTTGGT TGCCGATTGC TTTAGCAGGT
TTTGAAGAAG CCAATCCTTC CGCCATTTTT GTGATTTTTA TTACTGCAAT TTGGCCAATT
ATTCTTAACA CAACCGTCGG AGTACAACAG ATTCCTAAAG ACTATAAAAA TGTCGCTAAA
GTGTTGCGTT TATCAGGTTT TAAATACTTT TGGGAAATCA TGTTCCCTGC TGCCGTTCCT
TATATTTTTA CCGGGTTAAG AATTGGCATT GGACTTTCTT GGTTAGCCAT TGTTGCTGCT
GAAATGTTAG TCGGTGGTGT TGGTATTGGT TTCTTTATTT GGGACTCCTA TAATAGTTCC
CAATTACCGG AAATCATCGT TGCTTTAATC TATGTAGGGT TAGTGGGTTT AATCCTTGAC
CGTTTAGTGG GTTTTATTGC TTCTTTAGTC ATTCCATCAG AAGAAAACCA GTAA
 
Protein sequence
MTVNLNKSLR KPNFIVSLIK NPPRKLLAPV CAILFILVVW QILCNSPEAN LPSPLKTFQE 
TSTLIFNPFF DNGGTDKGLF WQITASLQRV AIGYSLAAIV GIALGILIGS NSFIYDAVDP
IFQVLRTVPP LAWLPIALAG FEEANPSAIF VIFITAIWPI ILNTTVGVQQ IPKDYKNVAK
VLRLSGFKYF WEIMFPAAVP YIFTGLRIGI GLSWLAIVAA EMLVGGVGIG FFIWDSYNSS
QLPEIIVALI YVGLVGLILD RLVGFIASLV IPSEENQ