Gene RPB_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_2837 
Symbol 
ID3910630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3230070 
End bp3230870 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content65% 
IMG OID637884737 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_486450 
Protein GI86749954 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.115716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC GCTCTTTCGC CGTGAGGCTG CGCAGCATCG CACTTGCCGT CGTGGTGCCG 
TTCGGCCTGC TGCTGTTGTG GGACGTGCTG GTGCGCTGGA CCGGCACGCG GCTGGTGCCG
CCGCCGTCCG GCGTCGCGGT GATGATGTGG GATTTCGCCT TCGGCGGAAT CTACGACGAT
GCCTATAGCG GCAGCCTGCC GATCCATTTC TGGAAATCGG TGCAGCGGGT CTATGGCGGC
TTCTTCCTGG CCGCGCTGGT CGGCATCCCA CTGGGGCTGA TGATCGGCCG GATTCCGCTG
CTGCGCGCGA TGCTCGATCC GACGCTGTCG CTGTTGCGGC CGATCCCGGT CACCGCGTGG
CTGCCGCTGT CGATGATCTT CTTCGGGCTC GGTCCGAAAT CGGCGGTGTT CCTGGTGTTC
CTCGGCGCGT TCTATCCGAT CCTGCTGAAC ACGATTTTCG GGGTGAAATC CGTCGATGCC
CGGCTGTTCG AGGCGGCCGG CATGCTGGGC TGCCGCGGCC CGCAATTGTT CCGCGCGGTG
GTGCTGCCGG CGGCGTTGCC CAGCATCTTC AACGGCCTGC GGTTGGGCGC TTCCTTCGCC
TGGATCCTGA TCGTGGTCGG CGAGATGACC GGCGTGCCGG AAGGGCTCGG CGCGGTCATC
ATGGACGGCC GCACGCTGTC GCGCACCGAC CTCGTCATCA CCGGCATGAT CATCATCGGC
ATCACCGGAT TCCTCTCCGA TCGCATTCTG GTGGCGCTCA GCAATTACTT CCTTCGCTGG
AGTCCGCAGC ATCATGCTTG A
 
Protein sequence
MRGRSFAVRL RSIALAVVVP FGLLLLWDVL VRWTGTRLVP PPSGVAVMMW DFAFGGIYDD 
AYSGSLPIHF WKSVQRVYGG FFLAALVGIP LGLMIGRIPL LRAMLDPTLS LLRPIPVTAW
LPLSMIFFGL GPKSAVFLVF LGAFYPILLN TIFGVKSVDA RLFEAAGMLG CRGPQLFRAV
VLPAALPSIF NGLRLGASFA WILIVVGEMT GVPEGLGAVI MDGRTLSRTD LVITGMIIIG
ITGFLSDRIL VALSNYFLRW SPQHHA