| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5896 |
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| Symbol | nrtB |
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| ID | 7380993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 908899 |
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| End bp | 909792 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649415 |
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| Product | nitrate ABC transporter permease protein |
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| Protein accession | YP_002547652 |
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| Protein GI | 222106861 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.149001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAA GTCTTCGCAA AGCAGAACCC GCAACCATCA CCGCCCCTCA ATCAGCTGGA
ACGGTGGTTG CCATGGCACG CCGCCCCACT CGCAGGTTCA ACAGCCAGCG CATCGGCGCA
AATGTGCTGC GCAATGTCGT GCCACCATTC GTCGTTCTCG CCATCCTGCT GGGCATCTGG
CAGATCGCCT GTTCCCATGC TGGCGCGACC TTGCCGCCGC CAAGCCAGGT CTGGGAAGAA
GCCCATGACC TGATCACGGC CCCCTTCTTC AACAATGGGC CGCAGGATAT CGGCCTTGGC
CTGCGCGTTC TGGTGTCGCT GGAGCGGGTG GCAATCGGCT TCGGGCTGGC GGCGATTGTC
GGCGTCTTTC TCGGTGCGGT GGTCGGCCAG AGCATCTGGG CAATGCGGGG CCTTGACCCG
ATCTTCCAGA TCTTGCGCAC CGTGCCGCCG CTTGCCTGGT TGCCTCTGTC ACTCGCGGCC
TTCCAGAATT CCAATCCGTC GGCAATTTTC GTGATCTTCA TCACCTCGAT CTGGCCGGTG
ATCATCAACA CCGCCGTCGG TGTGCGCAAT ATTCCCGACG ATTACCGCAA TGTTGCCCGG
GTGCTGCGGC TCAACCCGCT GGAATTCTTC ATCCGCATCA TGGTGCCTGC CGCCGCCCCT
TACATCTTTA CCGGGCTTCG CATCGGCGTC GGCCTGTCAT GGCTGGCCAT CGTTGCCGCT
GAAATGCTGA CCGGCGGCGT CGGCATCGGC TTCTTCATCT GGGATGCGTG GAACTCCTCG
CGGCTCTCCG ACATCATTGT GGCGCTTGCC TATATCGGCG TGACCGGCTT TGTCCTCGAC
AAGCTCGTCG CTCTCCTTGG CAGTGTCATC ACCCGTGGCA CCGCGAAGAA CTAA
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| Protein sequence | MSASLRKAEP ATITAPQSAG TVVAMARRPT RRFNSQRIGA NVLRNVVPPF VVLAILLGIW
QIACSHAGAT LPPPSQVWEE AHDLITAPFF NNGPQDIGLG LRVLVSLERV AIGFGLAAIV
GVFLGAVVGQ SIWAMRGLDP IFQILRTVPP LAWLPLSLAA FQNSNPSAIF VIFITSIWPV
IINTAVGVRN IPDDYRNVAR VLRLNPLEFF IRIMVPAAAP YIFTGLRIGV GLSWLAIVAA
EMLTGGVGIG FFIWDAWNSS RLSDIIVALA YIGVTGFVLD KLVALLGSVI TRGTAKN
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