| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4471 |
|---|
| Symbol | |
|---|
| ID | 6977565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 104948 |
|---|
| End bp | 105841 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643393649 |
|---|
| Product | nitrate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002278467 |
|---|
| Protein GI | 209546549 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.5689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC TGGCAAGTCA AGAAAATCCC TCCACTGCTG CCGCTACCAA GCCGGCGGCG
AAGGTTCTGC CATTTTCCGG CAAGCACGGA TCACGGATCG ATTTCCGTCG TACGGCAATC
GCCGCGTTTC GCAACGTCGT TCCGCCAGTC GTCGTGCTGG CACTCATCCT GCTCATGTGG
CAAGTGCTCT GTTCATCGCC GGATGCCTCT CTGCCCTCGC CGCATCAGGT CTGGCAGGAG
AGCTACGACC TGATCGCCTA TCCGTTCTTC AACAACGGCT CCCAGGATAT CGGGCTTGGC
TGGCGCGTGC TCGTTTCGCT GCAGCGCGTG CTCTATGGCT TTGGCCTTGC CGCCGTCACC
GGGGTTATCA TCGGGGCGAT CATCGGCCAA TCGGTCTGGG CAATGCGCGG TCTCGATCCG
ATCTTCCAGG TGCTGCGAAC GGTTCCGCCG CTCGCCTGGC TGCCGCTATC GCTCGCAGCC
TTCCAGGATT CCAACCCTTC GGCGATCTTC GTTATCTTCA TCACCTCGAT CTGGCCGGTG
ATTATCAACA CTGCCGTCGG CGTACGCAAC ATTCCGCAGG ACTACCGCAA CGTCGCCGAA
GTGCTGCGGC TCAACCAGTT CGAGTTTTTC TGGAAGATCA TGCTGCCTTC GGCGGCCCCC
TACATCTTCA CCGGCCTCAG GATCGGCGTC GGCCTCTCCT GGCTCGCCAT CGTCGCAGCC
GAAATGCTGA CGGGCGGCGT CGGTATCGGC TTCTTCATCT GGGACGCATG GAACTCGTCG
CGCCTGCCGG ACATCATCGT CGCGCTCGCC TATATTGGCA TCGTAGGCTT CGTCCTCGAC
AAGCTGGTGG GTGCGCTCGG CAAACTTATC ACTCGCGGCG CCACCGCCAA CTGA
|
|---|
| Protein sequence | MPALASQENP STAAATKPAA KVLPFSGKHG SRIDFRRTAI AAFRNVVPPV VVLALILLMW
QVLCSSPDAS LPSPHQVWQE SYDLIAYPFF NNGSQDIGLG WRVLVSLQRV LYGFGLAAVT
GVIIGAIIGQ SVWAMRGLDP IFQVLRTVPP LAWLPLSLAA FQDSNPSAIF VIFITSIWPV
IINTAVGVRN IPQDYRNVAE VLRLNQFEFF WKIMLPSAAP YIFTGLRIGV GLSWLAIVAA
EMLTGGVGIG FFIWDAWNSS RLPDIIVALA YIGIVGFVLD KLVGALGKLI TRGATAN
|
|---|
| |