Gene Mbar_A1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1031 
Symbol 
ID3625032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1253896 
End bp1254681 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content41% 
IMG OID637699921 
Productsulfonate ABC transporter, permease protein 
Protein accessionYP_304579 
Protein GI73668564 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTA ACTTCATAAA AACAATTAAA GAAAAAGGCG TTGAAGCATT ATCTCTCATA 
GTTGCAATTG CAATATGGCA GCTCGCAGCA GACGTGATTG TACAGAACAA ATTTAAGCTG
CCTAGTTTTT ATGATGTGAT AATCTCTTTT TCTGCAATTG TAAAGAGCGG GCTAATTTTT
ACAGATACAT TAACAAGCCT GATTAACTTT TCAATTGGTA TTGCTGGCGC TTTTGTAATT
GGAATTCCCC TTGGAATAGC CATGGGATGG TTTAAGGAAA TAAACAGAGC AATCGACCCT
ATAATAGAGA TACTGCGTCC TATCCCCCCC ATCGCCTGGA TTCCCTTTGC TATCATATGG
TTTGGGCTTA CCCACCAGGC CGCAGGTTTT GTTGTATTTG CAGGAATGGT TTTTCCAATT
ATCATCAATA CATATACTGG CTTTAAGAAC GTACCGAAAG TTTATGTTGA AGCCGCAAGA
GTTCTTGGTT GTACCCGAAA CCTGGACCTT ATACGTTATA TTGCAATTCC CTCAGCTATG
CCTTCAATTG TTGCAGGAAT CAGGATTGCT ATGGGTGTAG GCTGGATGTG CCTTGTAGCT
GCAGAAATGT TTGGGAGCGA CAGCGGACTC GGATATGAGA TATGGCACAA TTACTACATG
CACAGGATGG ATTTCGTACT TGTTTATATG TTGCTGCTCG GATTTGTTGG CCTTTTAATT
GACCGTTTCT TCAGGCGTTA TGTAGACGCA AAATTACTGA GATGGACATC AGGAACTGTG
GTATAA
 
Protein sequence
MNVNFIKTIK EKGVEALSLI VAIAIWQLAA DVIVQNKFKL PSFYDVIISF SAIVKSGLIF 
TDTLTSLINF SIGIAGAFVI GIPLGIAMGW FKEINRAIDP IIEILRPIPP IAWIPFAIIW
FGLTHQAAGF VVFAGMVFPI IINTYTGFKN VPKVYVEAAR VLGCTRNLDL IRYIAIPSAM
PSIVAGIRIA MGVGWMCLVA AEMFGSDSGL GYEIWHNYYM HRMDFVLVYM LLLGFVGLLI
DRFFRRYVDA KLLRWTSGTV V