More than 300 homologs were found in PanDaTox collection
for query gene M446_0397 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  100 
 
 
285 aa  545  1e-154  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  79.17 
 
 
286 aa  397  1e-109  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  81.47 
 
 
293 aa  377  1e-103  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  63.81 
 
 
294 aa  299  3e-80  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  61.33 
 
 
266 aa  291  6e-78  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  49.3 
 
 
322 aa  243  3e-63  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  43.23 
 
 
283 aa  182  6e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  41.48 
 
 
273 aa  177  1e-43  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  43.14 
 
 
288 aa  171  1e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  39.5 
 
 
319 aa  170  2e-41  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  42.16 
 
 
269 aa  171  2e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  44 
 
 
253 aa  170  3e-41  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  46.5 
 
 
274 aa  169  7e-41  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  38.54 
 
 
306 aa  168  8e-41  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  40.5 
 
 
252 aa  167  2e-40  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
314 aa  163  2.0000000000000002e-39  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  38.13 
 
 
266 aa  162  5.0000000000000005e-39  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
273 aa  162  7e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
273 aa  162  7e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
281 aa  161  1e-38  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  39.9 
 
 
254 aa  160  3e-38  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
305 aa  158  9e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
273 aa  158  1e-37  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  43 
 
 
271 aa  157  2e-37  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  38.37 
 
 
269 aa  157  2e-37  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
259 aa  156  4e-37  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  38.93 
 
 
291 aa  156  5.0000000000000005e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
273 aa  155  7e-37  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  36.78 
 
 
265 aa  155  1e-36  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  43.94 
 
 
283 aa  154  1e-36  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  40.69 
 
 
277 aa  154  2e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  37.78 
 
 
255 aa  154  2e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_011757  Mchl_4958  nitrate ABC transporter, inner membrane subunit  38.71 
 
 
285 aa  153  2.9999999999999998e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.413837  normal  0.165118 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
283 aa  153  2.9999999999999998e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_007517  Gmet_1900  binding-protein dependent transport system inner membrane protein  39.3 
 
 
252 aa  152  4e-36  Geobacter metallireducens GS-15  Bacteria  normal  0.128113  hitchhiker  0.000000000000910228 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  42.64 
 
 
291 aa  152  4e-36  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  42.64 
 
 
291 aa  152  4e-36  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  39.9 
 
 
286 aa  152  5e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_010172  Mext_4495  nitrate ABC transporter, inner membrane subunit  38.71 
 
 
285 aa  152  5e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  39.37 
 
 
261 aa  151  8.999999999999999e-36  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  44.04 
 
 
287 aa  151  8.999999999999999e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
256 aa  151  1e-35  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  44.78 
 
 
273 aa  150  2e-35  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5011  nitrate ABC transporter, inner membrane subunit  38.31 
 
 
286 aa  150  2e-35  Methylobacterium populi BJ001  Bacteria  normal  0.312092  normal  0.320206 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  44.78 
 
 
273 aa  150  2e-35  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  42.5 
 
 
253 aa  150  2e-35  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  42.08 
 
 
260 aa  150  3e-35  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
315 aa  150  3e-35  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  35.19 
 
 
279 aa  150  3e-35  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  35.75 
 
 
279 aa  150  3e-35  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  36.86 
 
 
282 aa  149  4e-35  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  41.5 
 
 
253 aa  149  4e-35  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  36.86 
 
 
282 aa  149  4e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  34.06 
 
 
279 aa  149  4e-35  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
280 aa  149  7e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_013530  Xcel_0423  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
297 aa  149  7e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.283538  n/a   
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  42 
 
 
253 aa  149  7e-35  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
295 aa  148  1.0000000000000001e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  35.14 
 
 
311 aa  148  1.0000000000000001e-34  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  39.37 
 
 
277 aa  147  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  45.27 
 
 
269 aa  147  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  45.27 
 
 
269 aa  147  2.0000000000000003e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  45.27 
 
 
269 aa  147  2.0000000000000003e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
275 aa  147  3e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2819  nitrate transport permease protein (nrtB)  35.48 
 
 
304 aa  146  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.233469  normal 
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  34.63 
 
 
282 aa  145  5e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
254 aa  146  5e-34  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  36.56 
 
 
285 aa  145  6e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  43.15 
 
 
291 aa  145  7.0000000000000006e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
264 aa  145  9e-34  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  33.57 
 
 
282 aa  145  1e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  39.41 
 
 
274 aa  145  1e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_009972  Haur_2787  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
272 aa  144  1e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.334714  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  38.58 
 
 
277 aa  144  2e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_007413  Ava_4139  binding-protein dependent transport system inner membrane protein  36.27 
 
 
275 aa  144  2e-33  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000000314222  normal  0.0106036 
 
 
-
 
NC_011884  Cyan7425_4571  nitrate ABC transporter, inner membrane subunit  33.71 
 
 
280 aa  144  2e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
270 aa  144  2e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  37.39 
 
 
297 aa  143  3e-33  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  30.42 
 
 
264 aa  143  3e-33  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0521  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
292 aa  143  3e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.367955 
 
 
-
 
NC_011368  Rleg2_4471  nitrate ABC transporter, inner membrane subunit  37.39 
 
 
297 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.5689 
 
 
-
 
NC_008340  Mlg_2588  nitrate ABC transporter, inner membrane subunit  38.84 
 
 
279 aa  143  4e-33  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.00171927 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
270 aa  143  4e-33  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
252 aa  142  4e-33  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_010511  M446_3744  nitrate ABC transporter, inner membrane subunit  37.67 
 
 
288 aa  142  5e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.441454  normal  0.10243 
 
 
-
 
NC_011146  Gbem_1734  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
252 aa  142  5e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
270 aa  142  5e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
270 aa  142  5e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  37.62 
 
 
270 aa  142  5e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_011658  BCAH187_A3058  taurine ABC transporter, permease protein  37.06 
 
 
274 aa  142  7e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2313  putative sulfonate ABC transporter, permease protein  36.4 
 
 
282 aa  141  9.999999999999999e-33  Bacillus cereus G9842  Bacteria  normal  0.797662  hitchhiker  0.00000011817 
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  37.13 
 
 
270 aa  141  9.999999999999999e-33  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2503  nitrate ABC transporter, inner membrane subunit  37.78 
 
 
298 aa  141  9.999999999999999e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
258 aa  141  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  38.92 
 
 
266 aa  141  9.999999999999999e-33  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2930  putative sulfonate ABC transporter, permease protein  36.4 
 
 
282 aa  141  9.999999999999999e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1837  aliphatic sulfonates ABC transporter, permease protein  37.62 
 
 
269 aa  140  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.669476  n/a   
 
 
-
 
NC_009080  BMA10247_0780  aliphatic sulfonate ABC transporter, permease protein  37.62 
 
 
273 aa  140  1.9999999999999998e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.175921  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1724  aliphatic sulfonate ABC transporter, permease protein  37.62 
 
 
273 aa  140  1.9999999999999998e-32  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1822  aliphatic sulfonates ABC transporter, permease protein  37.62 
 
 
269 aa  140  1.9999999999999998e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
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