| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3868 |
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| Symbol | |
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| ID | 7969725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4097306 |
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| End bp | 4098388 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794454 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945748 |
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| Protein GI | 239816838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.753162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CCGACCCCGC ATTGGGCTTC GATTCCCTCC CCTTCCGGGG GAGGGCCAGG
GTGGGGGCCG TGGCGCCCGA ACGCGCCACG GCTCCCGCCT CGACATCGCC CCGCACTCAA
GCAACTGCGC CCCCATGGCG CATCGGTTTC GCCGCCGCAG CCACATGGTT CGCCCTGGGC
CTGCTCACGC TCTACTGGCC GAACAAGGCC GTCGGCTTCA GCGACTGGGC CTACACCGAC
GAGTTCGGCA TCGCCGCCCT CGCGGTGGGC GCGCTGCTGC TGGCCGTTGC ATCGCTCGGG
CCGCGCGCCG GCCGCGTCGC ACATTCGCTG CGGCCCGCGG GCCCGTGGCT CGTCGCGCTA
CCGGTGCTGT TCGCGATCTG GGAGATTTCG ACCGCCAAGC TCGCGCTGCT CCCCACGCCG
TTCTTCGCGC CGCCGCAAAG CCTGGTCGAG ACCTACATCG ACGACTGGCG CCGCCTCGGC
GAAAGCCTGC TGCATTCGAC CCGGCTGCTC GCACACGGCT TCGTGCTGGG CGCGCTCGCG
GGCTTTCTCA CGGGCGTGAC CATCGGCTGG TCGCGCATCG CGGGCTACTG GGTGCATCCG
GTGCTGCGCT TCGTGGGGCC GGTGCCGGCT TCGGCGCTGC TGCCGCTGGC GTTCTTCTTC
TTTCCGTCGA GCTATGCAGC CGCGGTGTTT TTGATCGCGC TGGCGACCGG CTTTCCGGTG
GCGGTGCTCA CCTGGTCGGG CGTGGCGGGC GTCAACCGCA ACTACTACGA CGTGGCGCGC
ACCATGGGCG CGAGCGAGCG CTTCCTGGTG CTGCGCGTGG CCATTCCGGC CGCCTTGCCG
CAGGTGTTCG TGGGCCTTTT CATGGGGCTG GGCGCGGCGT TCTCGGTGCT CGTCACGGCC
GAGATGATGG GCGTGAAGGC GGGGCTGGGC TTCTATCTTT CGTGGGCGCA GGGCTGGGCC
TCGTACTCGA ACATGTACGC CGCGCTGATC GTGATGGCGG TGCTGTGCTC GGGCCTGATC
ACGCTGCTCT TCAAGGTGCG CGACCGCGTG CTGTCGTGGC AGAAGGGGAC AGTCAAATGG
TAG
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| Protein sequence | MSTPDPALGF DSLPFRGRAR VGAVAPERAT APASTSPRTQ ATAPPWRIGF AAAATWFALG
LLTLYWPNKA VGFSDWAYTD EFGIAALAVG ALLLAVASLG PRAGRVAHSL RPAGPWLVAL
PVLFAIWEIS TAKLALLPTP FFAPPQSLVE TYIDDWRRLG ESLLHSTRLL AHGFVLGALA
GFLTGVTIGW SRIAGYWVHP VLRFVGPVPA SALLPLAFFF FPSSYAAAVF LIALATGFPV
AVLTWSGVAG VNRNYYDVAR TMGASERFLV LRVAIPAALP QVFVGLFMGL GAAFSVLVTA
EMMGVKAGLG FYLSWAQGWA SYSNMYAALI VMAVLCSGLI TLLFKVRDRV LSWQKGTVKW
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