| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5517 |
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| Symbol | |
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| ID | 7975374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 218806 |
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| End bp | 219576 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796103 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002947377 |
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| Protein GI | 239820192 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGCT CCTCTTCCCC GCTGACGCGC GCGCTGCTGA TCGTGGCGCC GTGGCTGTTG
ATCCTCGCGC TCTGGTACGC CATCCGCGCG AGCGGCCTGG TCAATCCCGC GCTGGTGCCG
GCGCCGCACA TGGTGCTGGC CAAGTTCGTC GAGCTGTCGC GCGGCAGGCT GTGGGAAGAC
ATCTACATGT CGACGCAGCG CGTCTTCATC GGCGTCGCCC TGGGCGTGTC GCTGGCGGTG
CCGGTGGGCT TCTGCCTCGG CTGGTACCGC GGCCTGCGCA GCTTCATGGA CCCGGTCATC
AACTTCTTTC GCGCGCTGCC GCCGATTGCG CTGATTCCGC TGGTGATCGT GTACTTCGGC
ATCGGCGAGG CGGCCAAGAC CGCGATTCTT TTCTATGCCT CGTTCTTTGC GGGCGTGATC
GTCATGTACG AGGGCATCGC GCAGATCAGC CCGATCTACA TCAAGGTGGC GCGCACGCTG
GGCGCCAGCG ACGTGGAGAT CTTCGGCAAG GTGATCGTGC CGCTCACCAT TCCGCACATC
CTCACGGCGG TGCGCGTGGC GCTCGGCGTG GCGTGGGCCA CGCTGGTCGC GTCCGAGCTG
ATCGCGGCGC AGCAGGGCCT GGGTGCGCTG ATCCAGAACG CCTCGTCATT CTTCCAGCTC
GACATCATCT ACGTGGGCAT CATCTGCATC GGCGTGATCG CGCTCGTCAT GGACCTGCTG
CTGCGCCTTG CGACGCGCCG GCTGGTGGCC TGGCAGGACC GCATCGCCTG A
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| Protein sequence | MRSSSSPLTR ALLIVAPWLL ILALWYAIRA SGLVNPALVP APHMVLAKFV ELSRGRLWED
IYMSTQRVFI GVALGVSLAV PVGFCLGWYR GLRSFMDPVI NFFRALPPIA LIPLVIVYFG
IGEAAKTAIL FYASFFAGVI VMYEGIAQIS PIYIKVARTL GASDVEIFGK VIVPLTIPHI
LTAVRVALGV AWATLVASEL IAAQQGLGAL IQNASSFFQL DIIYVGIICI GVIALVMDLL
LRLATRRLVA WQDRIA
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