Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1812 |
Symbol | |
ID | 8665090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1935920 |
End bp | 1936693 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | ABC transporter, permease protein |
Protein accession | YP_003337544 |
Protein GI | 271963348 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.554956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.627316 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGGCC TGCCGGCCCG ATGGTGGAGC GTGCCCGTCG CGCTCGCAGG CTGGGAGCTG CTGACCCGGT GGGCTCGGGC GGTCTACTTC CCGCCGCCCT CGGCGATCGC GGCCCGGCTG CACGAGATGT GGTTCTCCGG ACCGGCCGCC CGCCTCTTCC TGACCGACGA GGCGCTCGGC GACGTGCTGC CCAGCCTGGG CAGGCTGCTG CTCGGCTGGA GTACGGCGTG CCTGGTCGGG ATCGTCGCCG GGGTGGCCGT CGGCCGCTCG GCCCGCCTGT CGGAGTATGT CGGCCCGCTG ATCCAGCTCG GCCGGTCCAT CCCCCCGCCC ACGCTGCTGC CGATCTTCCT GCTGCTGTTC GGCGTGGGGT CCCCGATGCA GGTGGCCGCC ATCGTGTTCG GCGTCACGTG GCCGGTGCTG ATCAACTCGG CGGACGGCGC CCGCTACGTG GACCGCGGAT ATCTGGAGAC CGCCCAGGTC TTCGGGGTGA ACCGGGGCCG GCGGCTGCTG CTGGTCGTTC TCCCGGCGGC GGCCCCGAAG ATATTCGCGG GCCTGCGGCT CAGCGTCTCG CTCGCCCTGA TCATGATGAT CGTCTCGGAG CTGGTCGGCA GCACCGAGGG CATCGGCTAC CGGATGCTGG TCGCCCAGAG CGAGCTGGAC ATCCCGTCGA TGTGGGCGGC GATCACCCTG ATCGGGCTGC TCGGCTACGG CCTGAACACG GCGTTCCTCC GGGTGGAGCG GCGCGTGCTC GCCTGGCACC CGGCCGCCGC CTGA
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Protein sequence | MRGLPARWWS VPVALAGWEL LTRWARAVYF PPPSAIAARL HEMWFSGPAA RLFLTDEALG DVLPSLGRLL LGWSTACLVG IVAGVAVGRS ARLSEYVGPL IQLGRSIPPP TLLPIFLLLF GVGSPMQVAA IVFGVTWPVL INSADGARYV DRGYLETAQV FGVNRGRRLL LVVLPAAAPK IFAGLRLSVS LALIMMIVSE LVGSTEGIGY RMLVAQSELD IPSMWAAITL IGLLGYGLNT AFLRVERRVL AWHPAAA
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