Gene Sros_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3065 
Symbol 
ID8666352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3344842 
End bp3345684 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003338758 
Protein GI271964562 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.228654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG TGAGGAAAGA CGCGGCGGCC CCCGCCGCGC GGGAGGCGGC CGTGACCGGG 
AAGGGCCCCG TGCCCCCCGG GAAGACCCGC TCCCGGACGA GGCGCTCGAC GCTGCCGCTG
ACGATCGGCT CCGGCCTGCT CGGCCTGGTC TTCTGGGTGG TGCTGGCCAA CATCGGCATC
CAGGGCTTCC CCGGCCCGCT CGAGGTGGCC GAGCGCGCCG TGACGTCGAT CGGCGACGGC
ACGCTCCTGG GTGACGCCCT CGCCAGCCTC CGCCGGGTTC TGACCGGTTT CGTGCTCGGC
GTCGCGCTCG CCGTGCCGGT CGGCTTCCTG ATGGGCTGGT ACCCGGTGAT CCGGGGCCTG
ATCGAGCCGT GGCTCCAGTT CTTCCGCATG GTCCCGCCGC TGGCGATCAT CCCGCTGGCC
ATCGTGCTCA TGGGCATCGA CGAGACCCCC AAGATATTCG TGATCTTCCT GGCCTCGTTC
CTGTCGTCGG TGGTCTCCAC CTTCCAGGGC GTGGTCTCCG TCGACTCCAC GCTGATCAAC
GCGGCCAGGG TCCTCGGCGC GAAGGACCGC ACCGTCTTCA CCGGGGTGGT CGTCCCCGCC
TCAACGCCCT TCATCCTCGT CGGCATGCGC ATCGGCCTCG GCGCCTCCTG GGCCACGGTG
GTGGCCGCCG AGCTGATCGC CGCCCAGGAG GGGCTCGGAT ACCGCATGCA GCAGGCCCAG
CTCTACTACG ACCTTCCGAC GATCTTCGTT CAGCTGATCG TCATCGGCCT CATCGGCCTC
ATCATGGACC GCGCGCTGCT CCTCGCCGAG CGTCGCCTGA CGAACTGGCA GGAGCGGAGG
TGA
 
Protein sequence
MATVRKDAAA PAAREAAVTG KGPVPPGKTR SRTRRSTLPL TIGSGLLGLV FWVVLANIGI 
QGFPGPLEVA ERAVTSIGDG TLLGDALASL RRVLTGFVLG VALAVPVGFL MGWYPVIRGL
IEPWLQFFRM VPPLAIIPLA IVLMGIDETP KIFVIFLASF LSSVVSTFQG VVSVDSTLIN
AARVLGAKDR TVFTGVVVPA STPFILVGMR IGLGASWATV VAAELIAAQE GLGYRMQQAQ
LYYDLPTIFV QLIVIGLIGL IMDRALLLAE RRLTNWQERR