| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2106 |
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| Symbol | |
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| ID | 3774325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2186064 |
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| End bp | 2186855 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637800551 |
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| Product | nitrate transport permease |
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| Protein accession | YP_401123 |
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| Protein GI | 81300915 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.727969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGAGAA CTCCTGTACC GCTTTACCTA CGTTGGGCGG TCTCCATCCT CAGCGTGCTT
GCGTTCCTAG CCATTTGGCA AATTGCGGCA GCTTCAGGAT TTTTAGGCAA AACTTTTCCT
GGCTCCCTGC GCACTTTGCA GGATTTGTTT GGATGGCTTT CAGATCCCTT CTTTGATAAC
GGCCCCAATG ACTTAGGGAT TGGCTGGAAC TTACTGATTA GTTTGCGTCG CGTTGCGATC
GGCTACCTGC TGGCAACAGT TGTTGCAATT CCTTTGGGGA TTGCAATCGG TATGTCGGCG
CTAGCTTCCA GTATTTTTTC GCCCTTTGTG CAACTCCTGA AGCCAGTTTC ACCTTTGGCC
TGGTTGCCGA TTGGTCTCTT CTTATTCCGA GATTCGGAAT TGACGGGTGT TTTTGTCATC
CTGATTTCGA GTCTGTGGCC AACGTTGATC AACACAGCGT TTGGGGTGGC GAATGTCAAT
CCTGACTTTT TGAAGGTTTC GCAATCTTTG GGAGCTAGTC GTTGGCGCAC GATTCTGAAG
GTGATTCTGC CCGCAGCATT GCCCAGCATC ATCGCGGGAA TGCGGATCAG CATGGGCATT
GCTTGGCTGG TCATTGTGGC AGCAGAGATG CTGTTGGGAA CAGGAATTGG CTATTTCATT
TGGAATGAGT GGAATAACCT ATCACTTCCT AATATTTTCT CGGCCATCAT CATCATTGGG
ATTGTTGGCA TTCTTCTCGA CCAAGGCTTC CGTTTTCTTG AGAACCAGTT TTCTTACGCA
GGCAACCGAT AA
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| Protein sequence | MVRTPVPLYL RWAVSILSVL AFLAIWQIAA ASGFLGKTFP GSLRTLQDLF GWLSDPFFDN
GPNDLGIGWN LLISLRRVAI GYLLATVVAI PLGIAIGMSA LASSIFSPFV QLLKPVSPLA
WLPIGLFLFR DSELTGVFVI LISSLWPTLI NTAFGVANVN PDFLKVSQSL GASRWRTILK
VILPAALPSI IAGMRISMGI AWLVIVAAEM LLGTGIGYFI WNEWNNLSLP NIFSAIIIIG
IVGILLDQGF RFLENQFSYA GNR
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