Gene Dhaf_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1918 
Symbol 
ID7258887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2055652 
End bp2056674 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID643561814 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002458394 
Protein GI219667959 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTATAA CAGAGAGTGA TAGAAACTAT CGTTTGCCAA AAGCAAAGCA GGCAGAGGTA 
AAACGTACGG CAAGTTTGCC GCAGATTCTC CAGATGCTCG CCCCGGCCGG AGCGCTTCTG 
GCGGCCTTGA TCCTGCATCT GACCCTGCCC AATGTCTATC CCAAGGGCTA CCAATCCGTG 
ACCTATCCCG CCTTCTTAAA AACCTGCCTG GGAATATATA TGATTTTTGG TCTGGCTGCC 
TTTTTGCTGC CGAAGCTGCG GGCCAAAATG CTGTATTTGT CCTGGCTCCT GACGGCGGCC 
GTCTTGCTGG TGGCGGCGCT GGATATGGCC ACCCTGAAAA CGGGGCATTT CCGCCTGCCT 
TTTGTCCCCA GCCCCGACAA GATTCTGAGC TCTGTGACGT CCAACCTGGA GACCTTGGCG 
GTGAGTCTTT ACTTTTCCAT GAAACTCTTG TTTACGGGAA TTGTGATCGG CATCATCAGC 
GGCATGATTT CAGGGATCCT GCTGGGCTGG AGCCAGATCT GCAATTATTG GTTCATGCCG 
GTTTTGAAAA TGATCGGGCC GGTTCCTTCG GCGGCCTGGC TGCCCATCGT CATGGTGCTC 
TTTGCCACCA GCCGCCAAGC CAGCGTTTTC CTGATCGTTT TAAGCATTTG GTTTCCTTTG 
ACCCTGATGG TCAGTTCGGC CATCCGCGAT ACGGATAAAC GGCTCGTCGA GACGGCCCGG 
GTTTTGGGTG CCGGTGAAGT TTACATCATG CTCCATGTGG CGCTCCCCGC CGCCTTGCCG 
GCCATGTTCA CCGGCTTGTT CATGGGTTTA AGCTCTTCCT TCGGAGCCTT GATTATTGCG 
GAGATGCTGG GGGTGGAAGC AGGACTGGGC TGGTATATCA AATGGGCCGA GGCCTGGGGT 
GAATACGCTA AAATATTCAG CACGGTGGGC ATCTTCATTA TAATTTTCTT TATCCTGATG 
GATACCCTCT TTAGACTGCG CAACCGCCTG CTGAAATGGC AGAAAGGGAC TGTGAGATGG 
TAG
 
Protein sequence
MAITESDRNY RLPKAKQAEV KRTASLPQIL QMLAPAGALL AALILHLTLP NVYPKGYQSV 
TYPAFLKTCL GIYMIFGLAA FLLPKLRAKM LYLSWLLTAA VLLVAALDMA TLKTGHFRLP 
FVPSPDKILS SVTSNLETLA VSLYFSMKLL FTGIVIGIIS GMISGILLGW SQICNYWFMP 
VLKMIGPVPS AAWLPIVMVL FATSRQASVF LIVLSIWFPL TLMVSSAIRD TDKRLVETAR 
VLGAGEVYIM LHVALPAALP AMFTGLFMGL SSSFGALIIA EMLGVEAGLG WYIKWAEAWG 
EYAKIFSTVG IFIIIFFILM DTLFRLRNRL LKWQKGTVRW