Gene Smed_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1127 
Symbol 
ID5321973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1195172 
End bp1195975 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID640790068 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001326813 
Protein GI150396346 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTACCC TGACGACAAA AGACGAGGAT ATCGCTGCGA AGCGGCTTTC ATCGGCAAAC 
CTGGCTCCCA TTGCCTTGAA CTTGATCGCT TTCACGTTGG CCATCGGATT TTGGTGGGGT
ATCACAGCGG CCAAGCTGGT CGTTCTTCCC GGACCGGCCG AGGTCTTCCA GCGCGCAATA
GAGCTGATCG CAAGTGGGCA GCTGCCGCTG GACATCGCCT CCAGTCTCCG CCGTGTGCTG
ACCGGCTTTC TGCTTGGCGT AGCAGCGGCC ATCCCCGTCG GTTTCCTGAT GGGCTGGTAT
GGCCCCGTCC GCGCACTGAT CGAGCCTTAC ATCCAGTTCT TCCGTATGGT CCCGCCCTTG
GCGATCATTC CGCTCGCTAT CGTAACCATG GGTATCGACG AAGCGCCGAA GGTCTTCGTC
ATCTTTCTCG CCTCGTTTCT CTCTTGTGTC GTGGCCACGT ATCAGGGCGT CATCAGCGTG
GACCGCACGC TGATCAGTGC GGCGCGCGTG CTCGGTGCCA ATGACGGAGT TCTTTTTCAT
CGCGTGATCA TCCCGGCTTC AATACCCTTC ATTCTGGTCG GCGTCCGGAT CGGGCTCGGC
TCGGCCTGGG CAACGGTCGT CGCAGCCGAA CTCATCGCCG CGCAATCCGG TCTTGGTTTC
CGGATGCAAC AGGCCCAGCT CTATTACGAT CTTCCCACCA TCTTCGTCAG TCTCGTCACC
ATCGGCATTC TCGGCCTCCT CATGGACCGC ATTGTTCAGG CGACGGAGCG GCGTCTAACC
CGTTGGCAGG AGCGTGCCCG ATGA
 
Protein sequence
MSTLTTKDED IAAKRLSSAN LAPIALNLIA FTLAIGFWWG ITAAKLVVLP GPAEVFQRAI 
ELIASGQLPL DIASSLRRVL TGFLLGVAAA IPVGFLMGWY GPVRALIEPY IQFFRMVPPL
AIIPLAIVTM GIDEAPKVFV IFLASFLSCV VATYQGVISV DRTLISAARV LGANDGVLFH
RVIIPASIPF ILVGVRIGLG SAWATVVAAE LIAAQSGLGF RMQQAQLYYD LPTIFVSLVT
IGILGLLMDR IVQATERRLT RWQERAR