Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1127 |
Symbol | |
ID | 5321973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1195172 |
End bp | 1195975 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790068 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001326813 |
Protein GI | 150396346 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTACCC TGACGACAAA AGACGAGGAT ATCGCTGCGA AGCGGCTTTC ATCGGCAAAC CTGGCTCCCA TTGCCTTGAA CTTGATCGCT TTCACGTTGG CCATCGGATT TTGGTGGGGT ATCACAGCGG CCAAGCTGGT CGTTCTTCCC GGACCGGCCG AGGTCTTCCA GCGCGCAATA GAGCTGATCG CAAGTGGGCA GCTGCCGCTG GACATCGCCT CCAGTCTCCG CCGTGTGCTG ACCGGCTTTC TGCTTGGCGT AGCAGCGGCC ATCCCCGTCG GTTTCCTGAT GGGCTGGTAT GGCCCCGTCC GCGCACTGAT CGAGCCTTAC ATCCAGTTCT TCCGTATGGT CCCGCCCTTG GCGATCATTC CGCTCGCTAT CGTAACCATG GGTATCGACG AAGCGCCGAA GGTCTTCGTC ATCTTTCTCG CCTCGTTTCT CTCTTGTGTC GTGGCCACGT ATCAGGGCGT CATCAGCGTG GACCGCACGC TGATCAGTGC GGCGCGCGTG CTCGGTGCCA ATGACGGAGT TCTTTTTCAT CGCGTGATCA TCCCGGCTTC AATACCCTTC ATTCTGGTCG GCGTCCGGAT CGGGCTCGGC TCGGCCTGGG CAACGGTCGT CGCAGCCGAA CTCATCGCCG CGCAATCCGG TCTTGGTTTC CGGATGCAAC AGGCCCAGCT CTATTACGAT CTTCCCACCA TCTTCGTCAG TCTCGTCACC ATCGGCATTC TCGGCCTCCT CATGGACCGC ATTGTTCAGG CGACGGAGCG GCGTCTAACC CGTTGGCAGG AGCGTGCCCG ATGA
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Protein sequence | MSTLTTKDED IAAKRLSSAN LAPIALNLIA FTLAIGFWWG ITAAKLVVLP GPAEVFQRAI ELIASGQLPL DIASSLRRVL TGFLLGVAAA IPVGFLMGWY GPVRALIEPY IQFFRMVPPL AIIPLAIVTM GIDEAPKVFV IFLASFLSCV VATYQGVISV DRTLISAARV LGANDGVLFH RVIIPASIPF ILVGVRIGLG SAWATVVAAE LIAAQSGLGF RMQQAQLYYD LPTIFVSLVT IGILGLLMDR IVQATERRLT RWQERAR
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