More than 300 homologs were found in PanDaTox collection
for query gene Mext_1168 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  100 
 
 
332 aa  629  1e-179  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  98.8 
 
 
332 aa  624  1e-178  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  90.82 
 
 
333 aa  468  1.0000000000000001e-131  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  80.61 
 
 
334 aa  403  1e-111  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  69.07 
 
 
352 aa  398  9.999999999999999e-111  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  63.78 
 
 
342 aa  362  4e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  68.87 
 
 
360 aa  358  6e-98  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  69.11 
 
 
331 aa  356  3.9999999999999996e-97  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  61.47 
 
 
353 aa  355  5e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  68.82 
 
 
347 aa  353  2e-96  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  66.05 
 
 
365 aa  353  2.9999999999999997e-96  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  66.05 
 
 
365 aa  353  2.9999999999999997e-96  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  65.59 
 
 
363 aa  352  5e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  70.33 
 
 
365 aa  352  7e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  65.31 
 
 
363 aa  349  5e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  64.94 
 
 
363 aa  347  1e-94  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  62.59 
 
 
348 aa  343  2.9999999999999997e-93  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  73.04 
 
 
331 aa  342  4e-93  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  73.17 
 
 
352 aa  342  4e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  64.01 
 
 
345 aa  339  4e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  64.01 
 
 
345 aa  339  4e-92  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  74.46 
 
 
331 aa  334  1e-90  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  61.95 
 
 
364 aa  334  2e-90  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  60.46 
 
 
334 aa  324  1e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  61.15 
 
 
346 aa  317  2e-85  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  70.82 
 
 
351 aa  311  1e-83  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  56.25 
 
 
331 aa  301  8.000000000000001e-81  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  50 
 
 
332 aa  280  4e-74  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  54.23 
 
 
337 aa  270  4e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  43.05 
 
 
338 aa  228  1e-58  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
340 aa  204  2e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
355 aa  196  3e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
342 aa  193  4e-48  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
302 aa  138  1e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
310 aa  131  2.0000000000000002e-29  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
277 aa  113  4.0000000000000004e-24  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
277 aa  112  8.000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  36 
 
 
269 aa  110  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
273 aa  110  4.0000000000000004e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  34.2 
 
 
271 aa  110  5e-23  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  31.33 
 
 
277 aa  109  6e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  31.65 
 
 
250 aa  108  1e-22  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
273 aa  108  1e-22  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
277 aa  108  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
274 aa  108  2e-22  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
252 aa  108  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.6 
 
 
274 aa  107  3e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.68 
 
 
273 aa  107  4e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  31.06 
 
 
266 aa  106  5e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  30.56 
 
 
283 aa  106  5e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
288 aa  106  6e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
273 aa  106  7e-22  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
273 aa  106  7e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
272 aa  105  9e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_007604  Synpcc7942_1238  nitrate transport permease  29.5 
 
 
279 aa  104  2e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  32.33 
 
 
252 aa  104  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  30.91 
 
 
258 aa  102  6e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
263 aa  102  1e-20  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  30.87 
 
 
295 aa  101  1e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  32.5 
 
 
261 aa  101  2e-20  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  28.03 
 
 
267 aa  100  4e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
305 aa  99  1e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  26.72 
 
 
275 aa  97.8  2e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  30.08 
 
 
306 aa  97.4  3e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  31.97 
 
 
274 aa  97.4  3e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  31.56 
 
 
274 aa  96.3  6e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
291 aa  96.3  7e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  30.8 
 
 
275 aa  96.3  7e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
280 aa  96.3  7e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  30.49 
 
 
260 aa  95.9  9e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
283 aa  95.1  1e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  32.64 
 
 
273 aa  95.5  1e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
273 aa  95.5  1e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
278 aa  95.5  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  31.72 
 
 
283 aa  94.4  2e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  30.21 
 
 
278 aa  94.7  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0722  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
272 aa  95.1  2e-18  Frankia sp. EAN1pec  Bacteria  normal  0.0102858  normal  0.0961586 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.47 
 
 
273 aa  94.4  2e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
302 aa  94  3e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  28.28 
 
 
257 aa  94.4  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  26.99 
 
 
255 aa  93.6  4e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
287 aa  93.6  4e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_012792  Vapar_5517  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
256 aa  93.6  4e-18  Variovorax paradoxus S110  Bacteria  normal  0.16627  n/a   
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  29.64 
 
 
297 aa  93.6  4e-18  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
281 aa  94  4e-18  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  29.33 
 
 
282 aa  93.6  5e-18  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  32.56 
 
 
263 aa  93.2  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  29.33 
 
 
282 aa  93.6  5e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  30.12 
 
 
279 aa  93.2  6e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_013510  Tcur_1455  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
269 aa  92.8  6e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0865715  n/a   
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  31.94 
 
 
273 aa  93.2  6e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  32.88 
 
 
290 aa  92.8  7e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4924  nitrate ABC transporter, inner membrane subunit  29.95 
 
 
280 aa  92.8  7e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.815767 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  28.76 
 
 
319 aa  92.4  1e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  34.59 
 
 
269 aa  92  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
269 aa  92  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
269 aa  92  1e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_27200  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  27.83 
 
 
253 aa  92.4  1e-17  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  28.79 
 
 
258 aa  92  1e-17  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  25.89 
 
 
314 aa  91.7  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
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