Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4306 |
Symbol | |
ID | 8335660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4885372 |
End bp | 4886208 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644957409 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003115011 |
Protein GI | 256393447 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0649738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00238236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCTGAGA TACCTTTCAC CCCGACCGTC CAGCTGCTCA AGCGGACGGT TCCGACACCG CTCACCAAGG TCTTCGCGGG GTTGGCGGTG TTCGGCAAGC GCACCGTCGC GATCGTCGCC TTCCTCGCCC TGTGGGAGAT CGCGCCGCGC GTCGGGCTGG TCGACCGGAC CTTCCTGGTG CCGTTCTCCG AGGCTGTCAA AGCCCTGATC GAGCTGGCGA AGGACGGCCA GCTGTGGGAC AACACGCGTG CCAGCCTCGT GCGCTCGCTG TCCGGCTTCC TCATCGCGAT CGGCGTGGGG GTGCCGCTGG GACTGCTGAT CGGCTGGTAC CGGCCGGTCG CGGAGATCCT CGGACCGCTG CTGGAGCTGT TCCGCAACAC CGCGGCGCTG GCGCTGCTGC CGGTCTTCAT CCTGCTGCTC GGTATCGGTG AGACCTCGAA GATCGCGATC GTGGTCTACG CCTGCACCTG GCCGATCCTG CTGAACACGA TCAGCGGGGT GCGCAGCGTC GATCCGGTCC TGATCAAGTC GGCGCGCTCG ATGGCGCTGC CGCCACACCG GCTGTTCGCC AAGGTGATCC TGCCCGCCGC GCTGCCGACG GTGTTCACCG GCATCCGGCT GGCCGGCGCC TCCTCGATCC TGGTGCTGGT CGCCGCCGAG ATGGTCGGCG CCAAGGCCGG GCTCGGATAT CTGGTCAACG CCTCCCAGCA GAACTTCGCC ATCCCCGACA TGTACGCCGC GATCATCGCC ATCGCGGTGG TCGGGCTGGT CTTCAACCAC CTGCTGGTGC TGCTGGAGCG GCGGCTGACC CGCTGGCGTC CGGCTTCCGG CGCCTGA
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Protein sequence | MAEIPFTPTV QLLKRTVPTP LTKVFAGLAV FGKRTVAIVA FLALWEIAPR VGLVDRTFLV PFSEAVKALI ELAKDGQLWD NTRASLVRSL SGFLIAIGVG VPLGLLIGWY RPVAEILGPL LELFRNTAAL ALLPVFILLL GIGETSKIAI VVYACTWPIL LNTISGVRSV DPVLIKSARS MALPPHRLFA KVILPAALPT VFTGIRLAGA SSILVLVAAE MVGAKAGLGY LVNASQQNFA IPDMYAAIIA IAVVGLVFNH LLVLLERRLT RWRPASGA
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