Gene Caci_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4306 
Symbol 
ID8335660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4885372 
End bp4886208 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID644957409 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003115011 
Protein GI256393447 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0649738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00238236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCTGAGA TACCTTTCAC CCCGACCGTC CAGCTGCTCA AGCGGACGGT TCCGACACCG 
CTCACCAAGG TCTTCGCGGG GTTGGCGGTG TTCGGCAAGC GCACCGTCGC GATCGTCGCC
TTCCTCGCCC TGTGGGAGAT CGCGCCGCGC GTCGGGCTGG TCGACCGGAC CTTCCTGGTG
CCGTTCTCCG AGGCTGTCAA AGCCCTGATC GAGCTGGCGA AGGACGGCCA GCTGTGGGAC
AACACGCGTG CCAGCCTCGT GCGCTCGCTG TCCGGCTTCC TCATCGCGAT CGGCGTGGGG
GTGCCGCTGG GACTGCTGAT CGGCTGGTAC CGGCCGGTCG CGGAGATCCT CGGACCGCTG
CTGGAGCTGT TCCGCAACAC CGCGGCGCTG GCGCTGCTGC CGGTCTTCAT CCTGCTGCTC
GGTATCGGTG AGACCTCGAA GATCGCGATC GTGGTCTACG CCTGCACCTG GCCGATCCTG
CTGAACACGA TCAGCGGGGT GCGCAGCGTC GATCCGGTCC TGATCAAGTC GGCGCGCTCG
ATGGCGCTGC CGCCACACCG GCTGTTCGCC AAGGTGATCC TGCCCGCCGC GCTGCCGACG
GTGTTCACCG GCATCCGGCT GGCCGGCGCC TCCTCGATCC TGGTGCTGGT CGCCGCCGAG
ATGGTCGGCG CCAAGGCCGG GCTCGGATAT CTGGTCAACG CCTCCCAGCA GAACTTCGCC
ATCCCCGACA TGTACGCCGC GATCATCGCC ATCGCGGTGG TCGGGCTGGT CTTCAACCAC
CTGCTGGTGC TGCTGGAGCG GCGGCTGACC CGCTGGCGTC CGGCTTCCGG CGCCTGA
 
Protein sequence
MAEIPFTPTV QLLKRTVPTP LTKVFAGLAV FGKRTVAIVA FLALWEIAPR VGLVDRTFLV 
PFSEAVKALI ELAKDGQLWD NTRASLVRSL SGFLIAIGVG VPLGLLIGWY RPVAEILGPL
LELFRNTAAL ALLPVFILLL GIGETSKIAI VVYACTWPIL LNTISGVRSV DPVLIKSARS
MALPPHRLFA KVILPAALPT VFTGIRLAGA SSILVLVAAE MVGAKAGLGY LVNASQQNFA
IPDMYAAIIA IAVVGLVFNH LLVLLERRLT RWRPASGA