| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0722 |
|---|
| Symbol | |
|---|
| ID | 5669138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 839317 |
|---|
| End bp | 840135 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641239649 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001505086 |
|---|
| Protein GI | 158312578 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0102858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0961586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCCCC TGCTCGAGGA TCCGACCGGC AAGCGGAACC GCGCGCGGCG CGCACGGGCG
GTCCCGTCGT GGGCGCGTCG GCTGGCCGGT CCGGCGCTGC TGCTGCTCGG GTGGTTCACG
GTCACCGGGT TCGACGTGGT CAGCGACCGC GCGTTCGCCT CGCCCGGCGC GGTGCTCGAC
GCCGCCCGGG AGCTGTGGGG TACGGGCGAG CTGGCCGACA ACCTCGGTAT GTCCCTCTAC
CGGGTCGGCT GGGGATGCGT CCTCGGGGTG GCGGTCGGCC TGGCGCTCGC CGTGATCGCC
GGGTTCTTCC GGTTCGGGGA GGACGTCGTC GACTCGGCGA TGAACTTCCT GCGCACCATT
CCGATCATTG CCCTGCTCCC GCTGATCATC GTGTGGATCG GCATCGGCGA GGAGGCGAAG
ATCTTCCTCA TCACCGCCGG CGTGATCTTC CCGGTCTACA TGAACACCTT CGCCGGGATC
CGGAGCGTGG ACATCAAGCT CGTCGAGGCG GGCCGGGCCT TCGGGCTCGG CCGGGCCGGT
CTCGTCCGGC GGGTGATCAT TCCCGGTGCC CTCCCGGGCT TCCTGGTGGG GCTGCGCTGG
TCCCTCGGCG TCGCCTGGCT GCTGCTGGTG TTCGCCGAGC AGGTCAACAC CGATTCCGGC
ATCGGCTACC TGCTCAACCG CGCCCAGGGC TGGAACCGCA CCGACATCAT GGTGCTCTGC
CTGGTGATCT ACGGAATCCT CGGCCTGCTC TGCGACGGCC TCGTCCGCCT GCTGGAAAGG
AGCCTGCTGT CATGGCGACG CGGATTCTCC GGGACCTGA
|
|---|
| Protein sequence | MAPLLEDPTG KRNRARRARA VPSWARRLAG PALLLLGWFT VTGFDVVSDR AFASPGAVLD
AARELWGTGE LADNLGMSLY RVGWGCVLGV AVGLALAVIA GFFRFGEDVV DSAMNFLRTI
PIIALLPLII VWIGIGEEAK IFLITAGVIF PVYMNTFAGI RSVDIKLVEA GRAFGLGRAG
LVRRVIIPGA LPGFLVGLRW SLGVAWLLLV FAEQVNTDSG IGYLLNRAQG WNRTDIMVLC
LVIYGILGLL CDGLVRLLER SLLSWRRGFS GT
|
|---|
| |