Gene YpsIP31758_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1848 
Symbol 
ID5384573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2141715 
End bp2142536 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content45% 
IMG OID640864832 
ProductABC transporter permease 
Protein accessionYP_001400823 
Protein GI153949819 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTAAGGTTTA TCAATATATC AAGTGGGTCA TTATGCCAAC TATTGTGCTG 
TTAATGTGGC AAATGCTCGC AATATCGGGC TGGATACAAC CCACAATACT TCCATCACCA
GTAGCCGTTG TGGTGCGCTG GTTCGATTAT TTTTTACCCT ATGAAGCCTA TAACCCAGAA
ACATCAAACT GGCTGATGTG GAGTCTTTCA GGGGAGTTAC TGCATGATGC CTGGGCGAGT
ATCTACCGCG TAATTATTGG TTTTCTAATC GGTGCTCTTC TTGCTCTACC ATTAGGATTA
TGGGTGGGTT CCAGTAAAAT TGGCAATGAC CTAATGAACC CTTTAATTCA GTTTCTTCGC
CCCATTCCGC CAATTGCATA TATTCCATTA GCGATGCTGT GGTTCGGCCT GGGGAATCCG
CCGGCATTTT TTTTGATAAG TATAGGGGCT TTTTTCCCAA TACTGATTAA TACCATCGCG
GGGGTCCGTA ATGTGGATGG CATATATATC CTGGCTGCAC GCAATCTAGG CGCAGGTCAA
GCCACGATGT TTCGCCGAAT TATTCTTCCG GCTGCCACTC CTTATATTCT TACAGGGATG
CGAGTTGGTA TAGGGACCGC GTTTATTTGC GTGATTGTGG CAGAAATGAT CGCCGTTAAT
AGCGGTGTTG GCTACCGAAT TCTGGAAGCG CGCGAATATA TGTGGTCCGA TAAAGTAATA
GCAGGCATGT TCACAATTGG TTTTCTTGGC CTGGTCATTG ATTTATGCAT GGATCGCCTG
AATCGGCGTC TTTTACGCTG GCACAGAGGA ATAGGCAACT GA
 
Protein sequence
MKNIKVYQYI KWVIMPTIVL LMWQMLAISG WIQPTILPSP VAVVVRWFDY FLPYEAYNPE 
TSNWLMWSLS GELLHDAWAS IYRVIIGFLI GALLALPLGL WVGSSKIGND LMNPLIQFLR
PIPPIAYIPL AMLWFGLGNP PAFFLISIGA FFPILINTIA GVRNVDGIYI LAARNLGAGQ
ATMFRRIILP AATPYILTGM RVGIGTAFIC VIVAEMIAVN SGVGYRILEA REYMWSDKVI
AGMFTIGFLG LVIDLCMDRL NRRLLRWHRG IGN