Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_1848 |
Symbol | |
ID | 5384573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 2141715 |
End bp | 2142536 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640864832 |
Product | ABC transporter permease |
Protein accession | YP_001400823 |
Protein GI | 153949819 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TTAAGGTTTA TCAATATATC AAGTGGGTCA TTATGCCAAC TATTGTGCTG TTAATGTGGC AAATGCTCGC AATATCGGGC TGGATACAAC CCACAATACT TCCATCACCA GTAGCCGTTG TGGTGCGCTG GTTCGATTAT TTTTTACCCT ATGAAGCCTA TAACCCAGAA ACATCAAACT GGCTGATGTG GAGTCTTTCA GGGGAGTTAC TGCATGATGC CTGGGCGAGT ATCTACCGCG TAATTATTGG TTTTCTAATC GGTGCTCTTC TTGCTCTACC ATTAGGATTA TGGGTGGGTT CCAGTAAAAT TGGCAATGAC CTAATGAACC CTTTAATTCA GTTTCTTCGC CCCATTCCGC CAATTGCATA TATTCCATTA GCGATGCTGT GGTTCGGCCT GGGGAATCCG CCGGCATTTT TTTTGATAAG TATAGGGGCT TTTTTCCCAA TACTGATTAA TACCATCGCG GGGGTCCGTA ATGTGGATGG CATATATATC CTGGCTGCAC GCAATCTAGG CGCAGGTCAA GCCACGATGT TTCGCCGAAT TATTCTTCCG GCTGCCACTC CTTATATTCT TACAGGGATG CGAGTTGGTA TAGGGACCGC GTTTATTTGC GTGATTGTGG CAGAAATGAT CGCCGTTAAT AGCGGTGTTG GCTACCGAAT TCTGGAAGCG CGCGAATATA TGTGGTCCGA TAAAGTAATA GCAGGCATGT TCACAATTGG TTTTCTTGGC CTGGTCATTG ATTTATGCAT GGATCGCCTG AATCGGCGTC TTTTACGCTG GCACAGAGGA ATAGGCAACT GA
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Protein sequence | MKNIKVYQYI KWVIMPTIVL LMWQMLAISG WIQPTILPSP VAVVVRWFDY FLPYEAYNPE TSNWLMWSLS GELLHDAWAS IYRVIIGFLI GALLALPLGL WVGSSKIGND LMNPLIQFLR PIPPIAYIPL AMLWFGLGNP PAFFLISIGA FFPILINTIA GVRNVDGIYI LAARNLGAGQ ATMFRRIILP AATPYILTGM RVGIGTAFIC VIVAEMIAVN SGVGYRILEA REYMWSDKVI AGMFTIGFLG LVIDLCMDRL NRRLLRWHRG IGN
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