More than 300 homologs were found in PanDaTox collection
for query gene Xaut_2776 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  100 
 
 
352 aa  689    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  57.91 
 
 
360 aa  385  1e-106  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  58.58 
 
 
365 aa  361  1e-98  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  58.58 
 
 
365 aa  361  1e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  70.45 
 
 
333 aa  360  2e-98  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  59.38 
 
 
363 aa  360  2e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  76.89 
 
 
334 aa  359  5e-98  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  60.31 
 
 
365 aa  358  6e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  75.7 
 
 
332 aa  357  9.999999999999999e-98  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  76.1 
 
 
332 aa  358  9.999999999999999e-98  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  60.56 
 
 
363 aa  357  1.9999999999999998e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  56.77 
 
 
347 aa  355  5e-97  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  63.45 
 
 
363 aa  351  1e-95  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  64.83 
 
 
364 aa  343  2.9999999999999997e-93  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  57.5 
 
 
353 aa  343  2.9999999999999997e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  69.92 
 
 
331 aa  342  9e-93  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  62.15 
 
 
331 aa  337  1.9999999999999998e-91  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  59.49 
 
 
352 aa  335  5.999999999999999e-91  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  61.92 
 
 
331 aa  334  1e-90  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  71.15 
 
 
342 aa  334  1e-90  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  60.82 
 
 
348 aa  331  1e-89  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  61.15 
 
 
345 aa  331  1e-89  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  61.15 
 
 
345 aa  331  1e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  59.93 
 
 
334 aa  320  1.9999999999999998e-86  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  54.57 
 
 
331 aa  313  1.9999999999999998e-84  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  57.97 
 
 
346 aa  311  7.999999999999999e-84  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  70.82 
 
 
351 aa  306  4.0000000000000004e-82  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  49.83 
 
 
332 aa  271  9e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  51.79 
 
 
337 aa  261  1e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  40.48 
 
 
338 aa  201  1.9999999999999998e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  42.13 
 
 
340 aa  193  3e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
355 aa  187  2e-46  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
342 aa  174  2.9999999999999996e-42  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
310 aa  139  7.999999999999999e-32  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
302 aa  136  7.000000000000001e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1238  nitrate transport permease  29.5 
 
 
279 aa  115  1.0000000000000001e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
277 aa  114  4.0000000000000004e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
288 aa  113  5e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
252 aa  112  6e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  34.36 
 
 
269 aa  109  8.000000000000001e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
278 aa  108  1e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  31.84 
 
 
278 aa  107  4e-22  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
283 aa  106  7e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.61 
 
 
273 aa  105  1e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
277 aa  104  2e-21  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  31.09 
 
 
319 aa  104  2e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  29.58 
 
 
275 aa  103  6e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
277 aa  102  7e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.92 
 
 
274 aa  102  1e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
277 aa  102  1e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_009921  Franean1_0722  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
272 aa  101  2e-20  Frankia sp. EAN1pec  Bacteria  normal  0.0102858  normal  0.0961586 
 
 
-
 
NC_007947  Mfla_0326  nitrate transport permease  29.73 
 
 
295 aa  101  2e-20  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.05 
 
 
273 aa  101  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  31.18 
 
 
305 aa  100  4e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  30.81 
 
 
271 aa  100  4e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
273 aa  100  4e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
273 aa  100  4e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
295 aa  100  4e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  28.26 
 
 
267 aa  100  5e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1455  binding-protein-dependent transport systems inner membrane component  38.01 
 
 
269 aa  99.8  6e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0865715  n/a   
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  33.33 
 
 
263 aa  99.8  6e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_009439  Pmen_2104  nitrate ABC transporter, inner membrane subunit  29.73 
 
 
283 aa  99.8  7e-20  Pseudomonas mendocina ymp  Bacteria  normal  0.0291571  normal  0.0240092 
 
 
-
 
NC_011726  PCC8801_3675  nitrate ABC transporter, inner membrane subunit  29.33 
 
 
280 aa  99.8  7e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3729  nitrate ABC transporter, inner membrane subunit  29.33 
 
 
280 aa  99.8  7e-20  Cyanothece sp. PCC 8802  Bacteria  normal  0.0184404  normal  0.11569 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
254 aa  99.4  8e-20  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0640  nitrate ABC transporter, inner membrane subunit  29.68 
 
 
279 aa  99.4  8e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  29.33 
 
 
306 aa  99.4  9e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
274 aa  99  1e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3520  nitrate ABC transporter, inner membrane subunit  28.64 
 
 
280 aa  99  1e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
280 aa  99.4  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
291 aa  99  1e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  29.59 
 
 
273 aa  98.6  1e-19  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
291 aa  99  1e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_013161  Cyan8802_2597  nitrate ABC transporter, inner membrane subunit  29.15 
 
 
280 aa  99  1e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  28.65 
 
 
250 aa  98.6  2e-19  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_012856  Rpic12D_0257  nitrate ABC transporter, inner membrane subunit  28.82 
 
 
283 aa  98.2  2e-19  Ralstonia pickettii 12D  Bacteria  normal  normal  0.738144 
 
 
-
 
NC_010682  Rpic_0236  nitrate ABC transporter, inner membrane subunit  28.82 
 
 
283 aa  98.2  2e-19  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  32.11 
 
 
252 aa  98.6  2e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
314 aa  98.2  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_007413  Ava_1026  nitrate transport permease  29.95 
 
 
279 aa  97.4  3e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.174596 
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  31.28 
 
 
280 aa  97.8  3e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  30.81 
 
 
273 aa  97.4  3e-19  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2273  nitrate transport permease  29.44 
 
 
299 aa  97.1  4e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2106  nitrate transport permease  33.15 
 
 
263 aa  97.1  4e-19  Synechococcus elongatus PCC 7942  Bacteria  normal  0.727969  normal 
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  29.73 
 
 
256 aa  97.1  4e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
269 aa  97.4  4e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  31.22 
 
 
297 aa  96.3  6e-19  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  30.54 
 
 
260 aa  95.9  8e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_007413  Ava_0874  nitrate transport permease  30.59 
 
 
283 aa  95.9  8e-19  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00348419  hitchhiker  0.00524559 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  29.9 
 
 
266 aa  95.9  9e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_003295  RSc0380  putative nitrate transmembrane ABC transporter protein  27.51 
 
 
287 aa  95.5  1e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.931268 
 
 
-
 
NC_012912  Dd1591_1439  nitrate ABC transporter, inner membrane subunit  29.67 
 
 
310 aa  95.5  1e-18  Dickeya zeae Ech1591  Bacteria  normal  0.062597  n/a   
 
 
-
 
NC_009436  Ent638_2324  nitrate ABC transporter, inner membrane subunit  30.2 
 
 
293 aa  95.5  1e-18  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  31.28 
 
 
282 aa  95.1  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_008825  Mpe_A1391  NO3-/NO2- ABC transporter  28.14 
 
 
305 aa  95.1  1e-18  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.36361 
 
 
-
 
NC_010524  Lcho_3842  nitrate ABC transporter, inner membrane subunit  30.48 
 
 
331 aa  95.1  2e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
253 aa  94.4  3e-18  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  31.96 
 
 
277 aa  93.6  4e-18  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  31.96 
 
 
277 aa  93.6  4e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
269 aa  93.2  5e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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