Gene PCC8801_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3520 
Symbol 
ID7102624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3671505 
End bp3672347 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content40% 
IMG OID643476532 
Productnitrate ABC transporter, inner membrane subunit 
Protein accessionYP_002373641 
Protein GI218248270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID[TIGR01183] nitrate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA CCCTTAACAC TCGTCGTAAA AATGGCAACA ATAATAGCTA CTTTGCTAAA 
TGGTGGAAAA AGAACTCTCA AAATATTCTG CCTCCTATTG TTGGAATTTT AGGCTTTTTA
GTGGTTTGGC AATTGTGTTC GATGATTGGC TTAATTAAGT TACCACCTCC TAGCGATCTC
TGGTTCAATG AACGGACTCG TATTTATTTA ATGTATCCCT TTTTTAATCG CGGAGGTACT
GATGTAGGCT TGTTTTGGCA ATCTATCGCT AGTTTACAAC GGGTCTTAAT TGGCTATACC
TTAGCGGCAA TTGTTGGAAT TGCTGCCGGG ATTTTTGTCG GATTAAATAG CTTTGCTAAT
AAAGCTTTAG ATCCTTTATT TCAATTCTTA AGAACCGTTC CTCCTCTAGC TTGGGTTCCT
ATTGCCTTAG CTGCCTTACA ACAAAACCAA CCTGCTGCCC TTTTCGTCAT CTTTATTACC
GCAGTTTGGC CAATTCTGAT TAACACAGCC GTTGGTGTTC AACAAATTCC CCAAGACTAC
ATCAACGTTC GCAAAGTATT ACAACTTTCC CAGAAAAAAT TCTTCTTTAA GATTCTGATT
CCTTCTGCCT TACCTTACAT TTTCACTGGT TTAAGAATTG CGATCGGGTT AGCGTGGTTG
GCGATTATCG CAGCAGAGAT TGTTATGTCT GGTATCGTTG GAATTGGCTT CTTTATCTGG
GATTCCTACC AAAATAACTA CATCAGTGAC ATCATTTTAG CTCTAGTTTA TATCGGTGCA
ATTGGCTTAA TGCTTGACCG TTTCATGGCT TGGGTTCAAA CCTTAATCTC TCCTGGGGAA
TAG
 
Protein sequence
MATTLNTRRK NGNNNSYFAK WWKKNSQNIL PPIVGILGFL VVWQLCSMIG LIKLPPPSDL 
WFNERTRIYL MYPFFNRGGT DVGLFWQSIA SLQRVLIGYT LAAIVGIAAG IFVGLNSFAN
KALDPLFQFL RTVPPLAWVP IALAALQQNQ PAALFVIFIT AVWPILINTA VGVQQIPQDY
INVRKVLQLS QKKFFFKILI PSALPYIFTG LRIAIGLAWL AIIAAEIVMS GIVGIGFFIW
DSYQNNYISD IILALVYIGA IGLMLDRFMA WVQTLISPGE