Gene Rpic12D_4592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4592 
Symbol 
ID8022280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1238182 
End bp1239219 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID644833364 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984504 
Protein GI241666145 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TCCCGCAAAC ACTGGAGGCG TCTGCCGCGC TCTCCAACCC ATTTGCCGAT 
GCCGTCGAGC GCGGAGGCGC ATGGCGCACC GGCGCCGTGG CCGCATTGGC CTGGGCCGCC
TTCGGCTTGC TGACGTGGCG CTGGCCCAAT CACGTGGTCG GTTTCAGCGA CTGGGCATTC
ACGGTGGAGT TGGGCGTTAC CGCGTTGATC GTTGGCATTG CGCTGTTCGT GATGGCGTTG
GCGGCGGGCC ATGTGTCCCC GTTGCGGCCC GTGCAGGAAG CGCTGCAACC GGCCGGGCCA
TGGCTGATCG CCGTGCCTGC GGTGCTGGCG TTGTGGGAGG TGCTGACCGC CAAGTCCGGT
GCATTGCCCA CACCGTTCTT TGCGCCGCCG CAGGCATTGA TCGAGGTCTA TTCGGAAGAC
TGGCCGCGTC TGGGCGACAG CGTGCTGAAT ACGCTCAAGC TGCTCGGCAT CGGCTATCTG
CTTGGTGCGT TGACGGGCTT TCTGGTGGGC GTGTCGATCG GCTGGTCGCG CGCAGTGGGT
TACTGGGTGC ATCCGGTGCT GCGCATTCTC GGGCCGTTGC CGGCGACGGC GCTGTTGCCG
ATCACGTTCT ACTTCTTCCC GTCGAGCTAT TCGGCGGCGG CTTTCCTGAT CGCCTTGGCA
GCCGGCTTTC CCGTGGCGGT GCTCACGTGG TCCGGCGTGG CGGGCGTGAG CAAAAGCTAC
TACGACGTTG CCCGCACGCT GGGCGCATCC AACGCATTCC TGGTGCTGCG TGTGGCGATT
CCGGCAGCCC TGCCGCAGGT GTTCGTGGGG CTGTTCATGG GGCTGGGCGC TTCGTTCACG
GTGCTGGTGA CGGCGGAGAT GATGGGCGTG AAGTCGGGCC TCGGCTGGTA CCTGACCTGG
GCGCAAGGCT GGGCATCGTA CGTCAACATG TATGCCGCGC TGATCGTCAT GGCGCTGCTG
TTCTCCAGCA TCATCACGCT GCTCTTCAAG GTGCGTGACC GCGCGCTGGT CTGGCAGAAG
GGGACGCTGA AATGGTAG
 
Protein sequence
MSTIPQTLEA SAALSNPFAD AVERGGAWRT GAVAALAWAA FGLLTWRWPN HVVGFSDWAF 
TVELGVTALI VGIALFVMAL AAGHVSPLRP VQEALQPAGP WLIAVPAVLA LWEVLTAKSG
ALPTPFFAPP QALIEVYSED WPRLGDSVLN TLKLLGIGYL LGALTGFLVG VSIGWSRAVG
YWVHPVLRIL GPLPATALLP ITFYFFPSSY SAAAFLIALA AGFPVAVLTW SGVAGVSKSY
YDVARTLGAS NAFLVLRVAI PAALPQVFVG LFMGLGASFT VLVTAEMMGV KSGLGWYLTW
AQGWASYVNM YAALIVMALL FSSIITLLFK VRDRALVWQK GTLKW