More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C0115 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  100 
 
 
352 aa  675    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  86.12 
 
 
353 aa  527  1e-148  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  59.89 
 
 
360 aa  374  1e-102  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  58.92 
 
 
352 aa  369  1e-101  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  63.21 
 
 
347 aa  362  5.0000000000000005e-99  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  63.28 
 
 
365 aa  359  4e-98  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  58.45 
 
 
363 aa  357  9.999999999999999e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  62.62 
 
 
365 aa  354  1e-96  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  62.62 
 
 
365 aa  354  1e-96  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  65.88 
 
 
331 aa  351  1e-95  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  62.62 
 
 
363 aa  350  2e-95  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  60.06 
 
 
331 aa  350  2e-95  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  60.06 
 
 
342 aa  346  3e-94  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  62.95 
 
 
363 aa  346  3e-94  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  62.87 
 
 
345 aa  344  1e-93  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  62.87 
 
 
345 aa  344  1e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  63.28 
 
 
364 aa  341  1e-92  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  73.58 
 
 
332 aa  339  2.9999999999999998e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  74.39 
 
 
333 aa  338  5.9999999999999996e-92  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  62.95 
 
 
331 aa  338  9e-92  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  73.17 
 
 
332 aa  338  9.999999999999999e-92  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  74.39 
 
 
334 aa  327  2.0000000000000001e-88  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  65.36 
 
 
351 aa  320  1.9999999999999998e-86  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  65.06 
 
 
348 aa  318  1e-85  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  58.1 
 
 
334 aa  317  2e-85  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  61.06 
 
 
346 aa  313  3.9999999999999997e-84  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  53.39 
 
 
331 aa  306  5.0000000000000004e-82  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  54.92 
 
 
332 aa  268  1e-70  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  50.77 
 
 
337 aa  266  4e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  40.47 
 
 
338 aa  213  3.9999999999999995e-54  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  41.13 
 
 
340 aa  202  5e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  39.76 
 
 
355 aa  196  5.000000000000001e-49  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  38.59 
 
 
342 aa  188  1e-46  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  30 
 
 
302 aa  127  2.0000000000000002e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  31.51 
 
 
310 aa  123  6e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
252 aa  114  3e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
277 aa  109  8.000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
277 aa  109  8.000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.8 
 
 
273 aa  107  4e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
277 aa  106  6e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  31.82 
 
 
269 aa  105  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_007604  Synpcc7942_1238  nitrate transport permease  25.56 
 
 
279 aa  103  4e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  27.2 
 
 
283 aa  103  4e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
273 aa  103  5e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
302 aa  102  9e-21  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  32.43 
 
 
271 aa  102  1e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  28.57 
 
 
266 aa  102  1e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
274 aa  102  1e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  34.07 
 
 
272 aa  101  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.34 
 
 
274 aa  101  2e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
285 aa  101  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
288 aa  101  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
273 aa  100  4e-20  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
291 aa  100  5e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
291 aa  100  5e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  31.3 
 
 
272 aa  100  5e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
273 aa  99.8  6e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.43 
 
 
273 aa  99.8  6e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  29.73 
 
 
261 aa  99.4  9e-20  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  37.28 
 
 
293 aa  99.4  9e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  28.89 
 
 
305 aa  98.6  1e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  33.86 
 
 
260 aa  97.8  2e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
254 aa  98.2  2e-19  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
263 aa  97.8  2e-19  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
295 aa  98.6  2e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
272 aa  97.4  3e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
NC_013510  Tcur_1455  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
269 aa  97.1  4e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0865715  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
256 aa  95.5  1e-18  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0722  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
272 aa  95.1  1e-18  Frankia sp. EAN1pec  Bacteria  normal  0.0102858  normal  0.0961586 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
286 aa  95.1  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  30.98 
 
 
286 aa  94.7  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
275 aa  95.1  2e-18  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2106  nitrate transport permease  32.11 
 
 
263 aa  94.7  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  0.727969  normal 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  31.96 
 
 
278 aa  94.7  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
314 aa  95.1  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  31.22 
 
 
290 aa  94.4  3e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  30.05 
 
 
273 aa  94  4e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.75 
 
 
269 aa  93.6  5e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
269 aa  93.6  5e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
269 aa  93.2  5e-18  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  33.75 
 
 
269 aa  93.6  5e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5985  putative ABC transporter (permease protein)  33.51 
 
 
255 aa  93.6  5e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
267 aa  92.8  7e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  28.4 
 
 
257 aa  92.8  8e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  30.85 
 
 
306 aa  92.4  9e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_014211  Ndas_4937  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
287 aa  92.4  1e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0773955  normal 
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  31.89 
 
 
314 aa  92.4  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  30.1 
 
 
278 aa  92.4  1e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  29.73 
 
 
281 aa  92.4  1e-17  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
258 aa  92  1e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  31.95 
 
 
291 aa  92  1e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
279 aa  92  1e-17  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
279 aa  91.7  2e-17  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_007333  Tfu_1692  putative ABC transporter membrane protein  29.19 
 
 
281 aa  91.3  2e-17  Thermobifida fusca YX  Bacteria  hitchhiker  0.00465779  n/a   
 
 
-
 
NC_011769  DvMF_0520  binding-protein-dependent transport systems inner membrane component  26.74 
 
 
265 aa  91.3  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.231998 
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  29.19 
 
 
261 aa  91.3  2e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  29.41 
 
 
273 aa  91.7  2e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  31.73 
 
 
262 aa  91.7  2e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
273 aa  91.7  2e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.18 
 
 
273 aa  91.7  2e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
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