More than 300 homologs were found in PanDaTox collection
for query gene BBta_5985 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_5985  putative ABC transporter (permease protein)  100 
 
 
255 aa  490  9.999999999999999e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.209656 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  55.47 
 
 
263 aa  256  3e-67  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_008786  Veis_0386  binding-protein-dependent transport systems inner membrane component  53.25 
 
 
266 aa  244  9.999999999999999e-64  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.314921 
 
 
-
 
NC_008254  Meso_3540  binding-protein-dependent transport systems inner membrane component  37.44 
 
 
258 aa  145  8.000000000000001e-34  Chelativorans sp. BNC1  Bacteria  normal  0.853389  n/a   
 
 
-
 
NC_013093  Amir_5422  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
269 aa  143  3e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
258 aa  143  3e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
281 aa  138  7e-32  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
273 aa  136  4e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  34.14 
 
 
273 aa  135  7.000000000000001e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
273 aa  130  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
283 aa  130  3e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_010681  Bphyt_2097  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
286 aa  129  6e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.961582  normal 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
273 aa  128  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
273 aa  128  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_005945  BAS2712  sulfonate ABC transporter permease  30.87 
 
 
282 aa  126  3e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_2920  sulfonate ABC transporter permease protein  30.87 
 
 
282 aa  126  3e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
291 aa  126  4.0000000000000003e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
291 aa  126  4.0000000000000003e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_008541  Arth_3081  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
257 aa  124  1e-27  Arthrobacter sp. FB24  Bacteria  normal  0.0826963  n/a   
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
258 aa  123  3e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.71 
 
 
279 aa  122  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3539  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
253 aa  122  6e-27  Chelativorans sp. BNC1  Bacteria  normal  0.158821  n/a   
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
283 aa  122  8e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  34.58 
 
 
260 aa  120  1.9999999999999998e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  31.3 
 
 
279 aa  120  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
285 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  33.76 
 
 
274 aa  119  3.9999999999999996e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  34.01 
 
 
271 aa  118  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_013093  Amir_5423  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
298 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1911  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
282 aa  117  1.9999999999999998e-25  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3350  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
250 aa  117  1.9999999999999998e-25  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1818  ABC transporter, permease protein  32.31 
 
 
263 aa  116  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.493092 
 
 
-
 
NC_007951  Bxe_A2159  sulfate ester ABC transporter inner membrane protein  33.73 
 
 
283 aa  116  3.9999999999999997e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.514359  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  35 
 
 
269 aa  116  3.9999999999999997e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009620  Smed_4214  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
281 aa  115  5e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
286 aa  115  5e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
291 aa  115  6e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2846  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
260 aa  115  7.999999999999999e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000143494  n/a   
 
 
-
 
NC_003909  BCE_2959  sulfonate ABC transporter, permease protein, putative  31.2 
 
 
284 aa  115  8.999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  0.132224  n/a   
 
 
-
 
NC_011772  BCG9842_B2313  putative sulfonate ABC transporter, permease protein  31.74 
 
 
282 aa  114  1.0000000000000001e-24  Bacillus cereus G9842  Bacteria  normal  0.797662  hitchhiker  0.00000011817 
 
 
-
 
NC_007511  Bcep18194_B2062  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.45 
 
 
280 aa  114  1.0000000000000001e-24  Burkholderia sp. 383  Bacteria  normal  0.332807  normal  0.624531 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
274 aa  114  1.0000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_2919  putative sulfonate ABC transporter, permease protein  30.25 
 
 
282 aa  114  1.0000000000000001e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.35916e-18 
 
 
-
 
NC_005957  BT9727_2663  alkanesulfonates transport system permease; sulfonate ABC transporter, permease  31.3 
 
 
282 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2930  putative sulfonate ABC transporter, permease protein  31.74 
 
 
282 aa  114  2.0000000000000002e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
255 aa  113  3e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  30.98 
 
 
262 aa  113  3e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2640  alkanesulfonates transport system permease; sulfonate ABC transporter, permease  31.3 
 
 
282 aa  112  4.0000000000000004e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  30.4 
 
 
252 aa  112  5e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_014151  Cfla_0286  binding-protein-dependent transport systems inner membrane component  34.82 
 
 
261 aa  112  6e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.122201  hitchhiker  0.000248355 
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.61 
 
 
262 aa  112  8.000000000000001e-24  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008688  Pden_5126  binding-protein-dependent transport systems inner membrane component  35.98 
 
 
280 aa  111  9e-24  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3413  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
271 aa  111  9e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0409101  normal  0.884011 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
255 aa  111  9e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  33.2 
 
 
273 aa  111  1.0000000000000001e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3034  binding-protein-dependent transport systems inner membrane component  32.64 
 
 
269 aa  111  1.0000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
273 aa  111  1.0000000000000001e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3082  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
280 aa  111  1.0000000000000001e-23  Arthrobacter sp. FB24  Bacteria  normal  0.0593827  n/a   
 
 
-
 
NC_013421  Pecwa_4334  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
536 aa  111  1.0000000000000001e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7235  binding-protein-dependent transport systems inner membrane component  30.16 
 
 
285 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.266674  normal 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  31.22 
 
 
257 aa  110  2.0000000000000002e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  31.12 
 
 
260 aa  110  2.0000000000000002e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  29.92 
 
 
286 aa  110  2.0000000000000002e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  30.98 
 
 
262 aa  110  2.0000000000000002e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
279 aa  110  2.0000000000000002e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
288 aa  110  3e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_013510  Tcur_0464  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
273 aa  110  3e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0467  taurine ABC transporter, permease protein, putative  30.57 
 
 
272 aa  109  4.0000000000000004e-23  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  35.44 
 
 
261 aa  109  4.0000000000000004e-23  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013510  Tcur_4670  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
259 aa  109  4.0000000000000004e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0406  putative taurine ABC transporter, permease protein  30.57 
 
 
272 aa  109  4.0000000000000004e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
265 aa  109  4.0000000000000004e-23  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_013595  Sros_1813  ABC transporter membrane protein  31.84 
 
 
256 aa  109  4.0000000000000004e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.48548  normal  0.635137 
 
 
-
 
NC_009485  BBta_7502  ABC transporter permease  30.04 
 
 
256 aa  109  5e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.50681 
 
 
-
 
NC_013510  Tcur_1385  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
284 aa  109  5e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0616622  n/a   
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
265 aa  108  6e-23  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_009921  Franean1_4522  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
329 aa  108  6e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  31.15 
 
 
272 aa  108  7.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_009668  Oant_3592  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
273 aa  108  7.000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5350  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
263 aa  108  8.000000000000001e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5439  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
263 aa  108  8.000000000000001e-23  Mycobacterium sp. KMS  Bacteria  normal  normal  0.56019 
 
 
-
 
NC_009077  Mjls_5729  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
263 aa  108  8.000000000000001e-23  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
315 aa  108  9.000000000000001e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
265 aa  107  1e-22  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
293 aa  107  1e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
269 aa  107  1e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
254 aa  107  1e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
265 aa  108  1e-22  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
259 aa  108  1e-22  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  28.24 
 
 
256 aa  107  1e-22  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3818  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
280 aa  107  2e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.615395  normal  0.42897 
 
 
-
 
NC_009485  BBta_5984  putative ABC transporter (permease protein)  34.54 
 
 
255 aa  107  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.27636 
 
 
-
 
NC_011894  Mnod_4886  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
281 aa  107  2e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.479856  n/a   
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
283 aa  107  2e-22  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
269 aa  107  3e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  32.94 
 
 
269 aa  106  3e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  36.81 
 
 
266 aa  107  3e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  34.66 
 
 
277 aa  106  3e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.23 
 
 
273 aa  106  3e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_010511  M446_5130  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
272 aa  106  3e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.612608  normal  0.0470724 
 
 
-
 
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