Gene BBta_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1369 
Symbol 
ID5156182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1454580 
End bp1455398 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID640556349 
ProductABC transporter membrane protein 
Protein accessionYP_001237508 
Protein GI148252923 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0458182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT CGGTCGACCG GCTGGTCGAA GCCTCTGGGT CGTCGGGGCC GGGCCATTTC 
GCGCGCCGCG CGGCGCGGCT GCTGCGCGGG ACAGTGGCGA TCTTCGCCTT CCTGGCCGCA
TGGGAAATCC TGCCGCGCCT CGGGCTCGTC GATACCACCT TCCTCCCGCC GTTCTCGACG
GCGCTGTCCG CCTTCGTCGA GATGGCGCGC AGCGGTGAGC TTGTGGAGCA TCTCGCAGCC
AGCGCCGGCC GCGCCTTCTC TGGCCTGATC CTCGCCGTTG CCGTCGGCGT GCCGCTCGGG
CTCGTCATCG GCTGGTACCG TTCGGTGGCG GAGATTCTCA ATCCGCTGCT CGAACTGTTC
CGCAACACCG CGCCGCTGGC GCTGCTCCCG GTGTTCGTCC TCATGCTCGG CATGGGCGAG
GTATCGAAGG TGGCGATGGT GTTCTACGCC TGTCTCTGGC CGATCCTGCT CAACACCGTG
TCTGGCGCGC GCGAGGTCGA TCCGCTGCTG ATCCGCTCCG CACGCTCGAT GGCGTTATCG
CAGACCCGGC TGTTCACGCG CGTGGTGGTG CCGGCCTCGC TGCCGTCGAT CTTCACCGGC
ATCCGCATCG CCGGCGCCTA TTCGATCCTG GTGCTGATCG CAGCCGAAAT GGTCGGGGCG
AAGGCCGGGC TCGGCTATCT CGTCAACTAT GCGCAGTTCA CGTTCGAAAT CCCTAAGATG
TACGCGGGCA TCGTCACGCT TTCGCTGCTC GGGCTGGTCC TGAACGAGGT GCTGGTGCTC
GCGGAACGGC GGCTCACCGC CTGGAAGGGC GACGCGTAG
 
Protein sequence
MSTSVDRLVE ASGSSGPGHF ARRAARLLRG TVAIFAFLAA WEILPRLGLV DTTFLPPFST 
ALSAFVEMAR SGELVEHLAA SAGRAFSGLI LAVAVGVPLG LVIGWYRSVA EILNPLLELF
RNTAPLALLP VFVLMLGMGE VSKVAMVFYA CLWPILLNTV SGAREVDPLL IRSARSMALS
QTRLFTRVVV PASLPSIFTG IRIAGAYSIL VLIAAEMVGA KAGLGYLVNY AQFTFEIPKM
YAGIVTLSLL GLVLNEVLVL AERRLTAWKG DA