| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1238 |
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| Symbol | |
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| ID | 3773526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1260972 |
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| End bp | 1261811 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637799667 |
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| Product | nitrate transport permease |
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| Protein accession | YP_400255 |
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| Protein GI | 81300047 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTCA CGCTTCGCCC CCCCAGTTCT GTCCGTCGCT CTGCTTGGGT TAAAAATCCA
AAGCTCAAGC CCTTTCTGCC CTACGTTGTC TGCCTGCCAA TTTTTCTGGC GATCTGGCAA
GTGATCTCGG CCATCCTCGG CCAAGATCGG CTACCTGGCC CGATCAACGT TGTGGCCAAC
ACTTGGATGC CCTACATCGT CGAGCCCTTC TTTGATAACG GCGGTACCAG CAAAGGTCTC
GGCCTCCAGA TTTTGATCTC CCTCCAGCGG GTAGCGATCG GCTATCTCTT GGCAGCCTGC
ACGGGCATCT TGGTCGGTGG TGTTCTAGGG ATGAGTAAAT TCCTGGGCAA AGGGTTGGAT
CCGGTGATCC AAGTCTTGCG AACAGTGCCG CCCTTGGCTT GGTTCCCTAT CTCCTTGATG
GTGTTTCAAG ATGCCAATAC CTCGGCAATC TTCGTCATCT TTATCACGGC GATCTGGCCG
ATCATTATCA ATACAGCCGT GGGAATTAAC CAAATTCCCG ATGACTATAA CAACGTTGCT
CGCGTCCTAA AGCTGAGCAA AAAAGATTAC ATCCTCAACA TCCTGATTCC TTCGACCGTT
CCCTACGTTT TTGCAGGTTT GAGAATTGCG GTTGGCCTAG CGTGGCTGGC GATCGTCGCT
GCTGAGATGC TCAAAGCGGA CGGTGGCATT GGCTACTTTA TTTGGGATGC CTACAACGCA
GGGGGTGACG GTAGCTCGAG CCAGATTATT CTGGCCATCT TCTACGTCGG TTTAGTCGGT
CTTAGTCTCG ATCGCCTCGT GGCTTGGGTC GGTCGGCTCG TCAGTCCTGT CAGTCGCTAG
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| Protein sequence | MTVTLRPPSS VRRSAWVKNP KLKPFLPYVV CLPIFLAIWQ VISAILGQDR LPGPINVVAN
TWMPYIVEPF FDNGGTSKGL GLQILISLQR VAIGYLLAAC TGILVGGVLG MSKFLGKGLD
PVIQVLRTVP PLAWFPISLM VFQDANTSAI FVIFITAIWP IIINTAVGIN QIPDDYNNVA
RVLKLSKKDY ILNILIPSTV PYVFAGLRIA VGLAWLAIVA AEMLKADGGI GYFIWDAYNA
GGDGSSSQII LAIFYVGLVG LSLDRLVAWV GRLVSPVSR
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