More than 300 homologs were found in PanDaTox collection
for query gene BBta_2515 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  100 
 
 
337 aa  654    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  50.3 
 
 
360 aa  307  2.0000000000000002e-82  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  53 
 
 
363 aa  298  7e-80  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  49.85 
 
 
331 aa  298  1e-79  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  55.3 
 
 
363 aa  294  2e-78  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  59.84 
 
 
365 aa  292  7e-78  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  59.84 
 
 
365 aa  292  7e-78  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  59.43 
 
 
365 aa  290  2e-77  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  59.84 
 
 
363 aa  290  3e-77  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  51.09 
 
 
347 aa  289  4e-77  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  52.41 
 
 
352 aa  281  8.000000000000001e-75  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  60.61 
 
 
331 aa  281  1e-74  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  60.25 
 
 
364 aa  280  2e-74  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  63.35 
 
 
331 aa  279  5e-74  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  50.82 
 
 
345 aa  277  2e-73  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  50.82 
 
 
345 aa  277  2e-73  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  51.84 
 
 
346 aa  270  2e-71  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  58.82 
 
 
342 aa  270  2e-71  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  46.38 
 
 
348 aa  267  2e-70  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  49.2 
 
 
334 aa  265  7e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  58.3 
 
 
333 aa  265  8e-70  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  58.69 
 
 
332 aa  265  8e-70  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  58.3 
 
 
332 aa  264  2e-69  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  49.22 
 
 
353 aa  262  6.999999999999999e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  58.69 
 
 
334 aa  259  5.0000000000000005e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  58.2 
 
 
352 aa  258  9e-68  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  57.08 
 
 
351 aa  245  9.999999999999999e-64  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  50.19 
 
 
332 aa  241  1e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  45.75 
 
 
331 aa  237  2e-61  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
338 aa  228  1e-58  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  39.78 
 
 
340 aa  208  1e-52  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
342 aa  197  3e-49  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  36.69 
 
 
355 aa  191  1e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  31.03 
 
 
310 aa  119  4.9999999999999996e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  27.44 
 
 
302 aa  118  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  33.05 
 
 
252 aa  112  8.000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  31.6 
 
 
266 aa  112  1.0000000000000001e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
273 aa  107  3e-22  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  30.48 
 
 
273 aa  107  3e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
280 aa  106  6e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  105  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  35.53 
 
 
269 aa  103  5e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
273 aa  103  5e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  29.36 
 
 
258 aa  103  6e-21  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
274 aa  102  6e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
277 aa  102  1e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  31.32 
 
 
319 aa  102  1e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  28.46 
 
 
283 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
273 aa  101  2e-20  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
255 aa  100  4e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  30.38 
 
 
290 aa  99.8  6e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
259 aa  99  9e-20  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  31.44 
 
 
263 aa  98.6  1e-19  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  33.88 
 
 
271 aa  98.6  1e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
278 aa  99  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  31.35 
 
 
274 aa  98.2  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  31.43 
 
 
252 aa  97.1  4e-19  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
265 aa  96.7  5e-19  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  29.6 
 
 
261 aa  96.7  5e-19  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  27.56 
 
 
277 aa  96.7  5e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
265 aa  96.7  5e-19  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
283 aa  96.7  6e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
281 aa  96.3  7e-19  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  29.17 
 
 
314 aa  96.3  7e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
305 aa  95.9  8e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  31.13 
 
 
264 aa  95.5  1e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
265 aa  95.5  1e-18  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  31.13 
 
 
264 aa  95.5  1e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  31.51 
 
 
286 aa  95.1  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_011004  Rpal_2882  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
268 aa  95.1  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.80309  n/a   
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  32.04 
 
 
260 aa  94.7  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_011981  Avi_7197  ABC transporter membrane spanning protein (aliphatic sulphonate)  28.95 
 
 
272 aa  94  3e-18  Agrobacterium vitis S4  Bacteria  normal  0.0116141  n/a   
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  31.2 
 
 
275 aa  94.4  3e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_007604  Synpcc7942_1238  nitrate transport permease  28.57 
 
 
279 aa  94.4  3e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
265 aa  94.4  3e-18  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_013165  Shel_27200  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  28.37 
 
 
253 aa  94  3e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  29.08 
 
 
272 aa  94.4  3e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  31.54 
 
 
260 aa  93.6  4e-18  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  31.63 
 
 
250 aa  94  4e-18  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_010725  Mpop_0411  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
279 aa  93.6  4e-18  Methylobacterium populi BJ001  Bacteria  normal  0.760866  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  28.35 
 
 
277 aa  94  4e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_007778  RPB_4060  binding-protein dependent transport system inner membrane protein  29.91 
 
 
256 aa  93.2  5e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  31.46 
 
 
262 aa  93.2  5e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011898  Ccel_0436  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
255 aa  93.2  5e-18  Clostridium cellulolyticum H10  Bacteria  normal  0.0448966  n/a   
 
 
-
 
NC_009253  Dred_1575  binding-protein-dependent transport systems inner membrane component  28.22 
 
 
254 aa  93.6  5e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0747147  n/a   
 
 
-
 
NC_010172  Mext_0332  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
279 aa  93.2  6e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.692278  normal 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
269 aa  92.8  7e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  35.62 
 
 
269 aa  92.8  7e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
269 aa  92.8  7e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
286 aa  92.4  9e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0102  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
263 aa  92  1e-17  Variovorax paradoxus S110  Bacteria  normal  0.922239  n/a   
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  28.02 
 
 
261 aa  92  1e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013595  Sros_1812  ABC transporter, permease protein  28.06 
 
 
257 aa  92.4  1e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.554956  normal  0.627316 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  27.89 
 
 
267 aa  92.4  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.69 
 
 
273 aa  92  1e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_012791  Vapar_1899  binding-protein-dependent transport systems inner membrane component  31.37 
 
 
275 aa  92.4  1e-17  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_21990  ABC transporter, inner membrane permease component  33.33 
 
 
273 aa  92  1e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
264 aa  92  1e-17  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
252 aa  92  1e-17  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  30.61 
 
 
275 aa  90.9  2e-17  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>