Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1575 |
Symbol | |
ID | 4958329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1713518 |
End bp | 1714282 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180748 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001112928 |
Protein GI | 134299432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0747147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTATC TGAAAGGTTT TGTCATACCA TTTGTCATTC TTATTCTATG GTTAATTGGC TCAGCCACGG AATCTATCAA CCAGTACATC ATCCCTCCGC CTACTAAAGT TTTACAAACA GCCCTTGATC TAACTGCCAG CGGGATATTG CTTAAACATA TTACCATTAG CCTGTATCGG GTCTTTGCTG GCTTTCTTTT GACCGTTTTA TTTGCCTTCC CTCTGGCGAT TCTGGTTGGC ATAAACCAAA GACTGGCACC CTACATAGAC CCAGTACTGG ATTTTCTAGG ACACATTCCA CCCATTTCCT GCATCCCGAT TCTCATTCTC TGGTTTGGCA TTGGAGAAAC TTCCAAGCTG GCGGTCATAA TTTTGGCTAC TTTTTTTCCG GTCTTCCTCA ACACCCTCAA CGGTATCTTA GGCTGCAATA AACAACTGTT GGAGGTTGGC GATGTATTTG GCTTCACTGC CCGGGACAAG TTTTTACGAA TCGTCATACC TGCTGCTCTC CCCTCCATCA TTGTGGGATT CCGACTGGGA TTAGGCTATA GCTGGCGCTC TCTTATCGGG GCCGAATTGA TAGCTGCATC TTCGGGCATT GGTTATATGA TTATTGACGC CGAACAGCTT TCCCGCCCAG ACATTATTAT TGTGGGGATT CTCACCATCG GATTGTTTGG TTACATAATC GATTACTGTT TCTTTAAACT AACAAACCAT CTAATTCCAT GGGCTGGAAA GAGGGTATCC TATGGCAGGA GTTAA
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Protein sequence | MHYLKGFVIP FVILILWLIG SATESINQYI IPPPTKVLQT ALDLTASGIL LKHITISLYR VFAGFLLTVL FAFPLAILVG INQRLAPYID PVLDFLGHIP PISCIPILIL WFGIGETSKL AVIILATFFP VFLNTLNGIL GCNKQLLEVG DVFGFTARDK FLRIVIPAAL PSIIVGFRLG LGYSWRSLIG AELIAASSGI GYMIIDAEQL SRPDIIIVGI LTIGLFGYII DYCFFKLTNH LIPWAGKRVS YGRS
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