| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1899 |
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| Symbol | |
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| ID | 7971078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2030805 |
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| End bp | 2031632 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792500 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943814 |
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| Protein GI | 239814904 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGG TGCTCGATGC GCCGGCGGCC CGCCCACCGG GCCGCTTCTT CAGGTTCGCG
CGCAGCCTTG GCCGCATAGC CGAACGCGGC ATTGGCATCG TGATCTTCCT GGCGCTGTGG
GAGGCATTGC CGCGCCTGGG CGTCGTGAGC GATGCCTACC TGAGCCCACC GTCCGCGGTG
CTCGCGAGCA TCGCCCAGCT CGTCGACACC GGCCAGCTCT GGAAGCATGT GGCGGCGAGC
CTGCAGCGCT CGCTGTGGGG CCTGCTGCTC GCGAGTTTCT CGGGCCTGGT GCTGGGTCTC
CTGATCGGTA GCTCGAAGCG GCTGGCGGCC ATCGTCGATC CGGTGCTGCA GCTGTTTCGC
CAGACCTCGG CCTTCGCGCT GTTCCCGGTG TTCATCCTGT TCCTGGGCAT CGGCGAGCTG
TCGAAGGTGG CGATCATCTT CTGGGCTTCG TTCTGGCCTG TGCTGCTGAG CACGGTGAGC
GGCGTGAAGC AGGTCGACCG GCTGCTCGTC AACTCGGCGC TGTCGATGGG CGCCTCGCAG
CGCTTCGTCT TCTTCAAGGT GGTGCTGCCG GCGTCGCTGC CGTCGATCTT CACCGGCGTG
CGGCTGGCGG GGGCCTACAG CATCACGGCG CTGGTGGCGG CCGAGATGAT CGGCGCGCAT
TCGGGCCTGG GCTTTCTCAC GCTCAATTCG CAGGAGACCT TCCAGATCCC GACGATGTAC
GCCGGCATCC TGCTGCTGGC CGTGCTCGGC CTGCTGCTCA ACTACCTGCT GGCCTTGCTG
GAGCGCCGGC TGCTGCGCTG GCGCAAGGGG CTGAGCCTCG ATGACTGA
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| Protein sequence | MSAVLDAPAA RPPGRFFRFA RSLGRIAERG IGIVIFLALW EALPRLGVVS DAYLSPPSAV
LASIAQLVDT GQLWKHVAAS LQRSLWGLLL ASFSGLVLGL LIGSSKRLAA IVDPVLQLFR
QTSAFALFPV FILFLGIGEL SKVAIIFWAS FWPVLLSTVS GVKQVDRLLV NSALSMGASQ
RFVFFKVVLP ASLPSIFTGV RLAGAYSITA LVAAEMIGAH SGLGFLTLNS QETFQIPTMY
AGILLLAVLG LLLNYLLALL ERRLLRWRKG LSLDD
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