Gene Cthe_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2803 
Symbol 
ID4809640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3304204 
End bp3304983 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content45% 
IMG OID640108223 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001039195 
Protein GI125975285 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00122675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGG AAATATTGAA GAAGGTATTG AAAGTTGTTG TAAGTATATC CGTACTCATA 
GGCATTTGGC AGCTGGCGGT ACTGTCGGGA AAATACGAGC CGTCGCTTCT TCCTTCTCCC
GCCAAAGTTC TTGAAGGAAT GGCGGAATTG ATAAAGGACG GAACGTTACT GACTCATTTC
AGAGTAAGCC TTGCCCGGTT CTTTATCGGA TATTTGGCTG CTATAGTTGC AGGAATAACT
TTAGGACTTT TGCTTGGCTG GAATAAAAGC GTATGGTCCT TTATTGAGCC GGTGGTGCAG
GTATTAAGGC CGGTTTCACC TATAGCATGG TTTCCTTTTA TTGTTCTGTG GTTTGGAATA
GGCGATACAC CTGCGATTGT TATAATTTTT ATAGCAGGAT TTTTCCCTAT TCTTCTTTCC
ACCGTTTCCG GGGTTGGAAA CGTGGATGCG ATTTATTTGA AAGTGGCTGA CAGCTTTGGA
ATCCGGCAGC CTCAGATGCT TTTTAAAATT ATTCTTCCGG CGGCCTTTCC GTTAATTGCA
AACGGGCTTC ATTTGGCTTT GGGATCAGCC TGGGTGTTCC TGGTGGCTGG AGAAATGGTA
GGTGCCCAGT CCGGTTTGGG ATATCTTATC ATAGATGCGA GGAATTCTTT AAGGTCGGAT
TTGGTTTTGG CAGGAATAAT ATTCATCGGA GCTTTGGGGC TTTTGCTGGA CAGACTCATA
AAACTTGTTG AAACCGGCAT TGAAAAACAG TGGGGAATAT CCCGAAGGGG GAGAAGCTGA
 
Protein sequence
MEMEILKKVL KVVVSISVLI GIWQLAVLSG KYEPSLLPSP AKVLEGMAEL IKDGTLLTHF 
RVSLARFFIG YLAAIVAGIT LGLLLGWNKS VWSFIEPVVQ VLRPVSPIAW FPFIVLWFGI
GDTPAIVIIF IAGFFPILLS TVSGVGNVDA IYLKVADSFG IRQPQMLFKI ILPAAFPLIA
NGLHLALGSA WVFLVAGEMV GAQSGLGYLI IDARNSLRSD LVLAGIIFIG ALGLLLDRLI
KLVETGIEKQ WGISRRGRS