Gene Bxe_C0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0115 
Symbol 
ID4009780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp128987 
End bp130045 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content66% 
IMG OID637952770 
Productnitrate/sulfonate/bicarbonate ABC transporter inner membrane protein 
Protein accessionYP_555390 
Protein GI91780183 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC AGTTCGAATC GATCGCGCCC CATGCTCCGG CCAGCGGCAC GCCCGCTGGC 
GACGCGACTC GTGCCGCCCC CCGGCGGGGG CTTTCACGCG GAGTACTGAG CGCCGGCCTC
GCAGCGATAG CGTGGCTGGC GAGCGCGGCG CAGACCACGT GGTGGCCGAG TCTCGACGAC
TGGCCGTACA CACGGGAATT CATCGTGCTG AAGCTGGCGC TTGCGGCGTT CGCTGTCGCA
TTGGGCGTCG CGGGCTGGCG CGGCTCGCAA AGCCCGTCGC CGACAGCCGC GCGCGCGAGT
GCGTGGCTTC GCGCGATGCC CTGGCTGCTT GCGCTGGCGC TTGGCGTCAG TGCATGGGAA
GCCGTCACCG CGCAACTGGA GTGGCTGCCG CGGCCATTTT TTGCGCCGCC GCAGGCACTG
ATCGGTGTCT TTGCCGAAGA CTATCCGCGG CTGGGTTCGA GTGTCGTGCA TTCGTTCGGC
TTGCTCGCGT ATGGGTACGT GCTCGGCGCA GTGGCGGGTT TCGTGACGGG TGTGAGCATC
GGCTGGTCGC AGGCCGTGAG CTATTGGGTC CATCCGGTTC TGCGCCTGAT TGGACCGTTG
CCGGCCACCG CATGGTTGCC GCTGGCCTTC TTCTTCTTTC CGTCGAGCTT CAGCGCGAGC
GTGTTTCTGA TCGCGCTGGC GACGGCTTTC CCGGTCGCCG TACTGACCTG GTCGGGCGTG
GCCAGCGTCA ATCCGGCCTA CTACGATATC GCGCGCACGC TCGGCGCGCG GCCCAGCTTT
CTGATCCTGC GCGTGGCGAT TCCGGCTGCG CTGCCGTCGG TGTTCGTCGG GCTGTTCATG
GGGCTCGGGG CGTCGTTTTC GGTGCTGATC GTCGCGGAGA TGATGGGCGT GAAAGCGGGT
CTCGGCTGGT ATCTGCAATG GGCGCAAGGC TGGGCCGCGT ATTCGAATAT GTATGCCGCG
TTGCTCGTGA TGGCGCTGAT GTGCTCCGGT CTGATTACGT TGCTGTTCCG CGTGCGCGAC
CGGTTGCTGG CCTGGCAAAA AGGATTGCTC AAATGGTAG
 
Protein sequence
MSTQFESIAP HAPASGTPAG DATRAAPRRG LSRGVLSAGL AAIAWLASAA QTTWWPSLDD 
WPYTREFIVL KLALAAFAVA LGVAGWRGSQ SPSPTAARAS AWLRAMPWLL ALALGVSAWE
AVTAQLEWLP RPFFAPPQAL IGVFAEDYPR LGSSVVHSFG LLAYGYVLGA VAGFVTGVSI
GWSQAVSYWV HPVLRLIGPL PATAWLPLAF FFFPSSFSAS VFLIALATAF PVAVLTWSGV
ASVNPAYYDI ARTLGARPSF LILRVAIPAA LPSVFVGLFM GLGASFSVLI VAEMMGVKAG
LGWYLQWAQG WAAYSNMYAA LLVMALMCSG LITLLFRVRD RLLAWQKGLL KW