Gene BBta_2566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2566 
Symbol 
ID5153133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2653812 
End bp2654570 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID640557474 
ProductABC transporter, membrane subunit 
Protein accessionYP_001238628 
Protein GI148254043 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.345232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCC TCGCCGTCAG GGTCCGCAAC CTCGTCGTGC CGCTCGTGGC GATCGTTGCC 
GTCTGGCAGC TGGCCAGTAG CATCGCGATC GTCAATCCGG TGCTATTTCC ATCGCCGGCG
AAAGTCCTCC TTGCTGCGAT CGACATGTTC AGGTCGGGCG TGCTGCTCAA GGACCTGCTC
GTGTCGCTGC GGCGCGCGGC CGCCGGCTTC GTCGTCGGCG CCTCGCTCGG CGTGACGCTC
GGGCTGCTGA CGTCGCGGGT GAGACTGTTT TCGATCGGCC TCAGCCCGCT GTTCAACCTG
CTGCGGCCGA TCCCGGCGAT CGCATTGGTG CCGATCGCGG TGGTGTGGTT CGGCATTGGC
GAGGAATCGA AATATTTCGT CATTGCCTAC ACGGTGTTTC TCGCTGTGTG GCTCAACACT
CATCACGGCA TGGAGCACGT TCCCGACACT TATATCCGCG CCGCGCGCTC GCTCGGCGCC
TCCAGGAGCC TCGAGTTTCT CCAGGTCGTG GTGCCGGCCT CGGCGCCGCA TATCTTCGCG
GGGCTGCGCT TCGGCGCCGC GCTCGCCTTC CTGAGCCTCG TGGCCGCCGA ACTGACCGGC
GCGTCCTCCG GGATCGGCTA CCGGCTCGAC GAGGCCCGGC AATACATTCT CGTCGATCGC
ATGTTCGTGG GACTGATCGA GCTCGGTGTC CTCGGCGCCA CGCTCGACAC CCTTTTCGTC
TGGCTCGGCC GCCGGCTGAT CCATTGGGAG CAGGCGTGA
 
Protein sequence
MRSLAVRVRN LVVPLVAIVA VWQLASSIAI VNPVLFPSPA KVLLAAIDMF RSGVLLKDLL 
VSLRRAAAGF VVGASLGVTL GLLTSRVRLF SIGLSPLFNL LRPIPAIALV PIAVVWFGIG
EESKYFVIAY TVFLAVWLNT HHGMEHVPDT YIRAARSLGA SRSLEFLQVV VPASAPHIFA
GLRFGAALAF LSLVAAELTG ASSGIGYRLD EARQYILVDR MFVGLIELGV LGATLDTLFV
WLGRRLIHWE QA