| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0102 |
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| Symbol | |
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| ID | 7971638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 101561 |
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| End bp | 102352 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644790705 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002942031 |
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| Protein GI | 239813121 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.922239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCA ACCGCCGCGT TGGCATCTTG GTGAACCGGC TCGGCTCGCT CGCCGTGCTC
CTTGCATTGA TTGCGCTGTG GTGGATGGCG AGCAACGCGG GCTGGGTGAG CCGCGTGTTC
CTGCCGACAC CGCAGGCCAC CTTCGCCAGC CTGCTCGAAG GCCTCAACCT CCGCGGCCCG
AACAGCAACG GCGAACTGCT CGCCTTCACG CAGGCCACGG TCGGCCGCAT GCTGCAGGGC
TGGCTGCTGG CGTCGCTGTT CGGCGTGCTG CTGGGCGCGG CCATCGGCGT GTCGCCCGCG
GTGCGCGCGT GGGTGCAGCC GACGCTCGAA TTCATTCGCC CGCTGCCCGC CTCCGCGCTG
CTGCCGCTTG CGATCTCGAT CTTCGGGCTG AACCCCGGCA TGGTGCTGTT CGTGGTGGCC
TTCGGCGCGA TGTGGCCGGT GCTGCTGGCC ACGGTGCACG GCTTCGCGGC CGTGGAGCCG
CGCCTCGCGG AAGTGGCGCG CTGCCTGCAG ATGTCGCGCG CGGCCTTTGT CTGGAAGATG
GGCCTGCCCA ACGCCATGCC CGACATCCTG GCCGGCATGC GGCTTGCGCT GACCATTGCG
CTGATCGTCG CGGTGGTGGG CGAAATGATC GCCTCGCAAA GCGGCCTGGG CCAGGCCATT
TTGCTGGCCG CGCGCGCCTT CCGCGCGAGC GACCTGTTCG CCGGCATCGT GCTGCTCGGG
CTGATCGGCT TCGCGAGCAA TGCGCTGCTG GCCTTTGCAG AAAAGCGGCT GCTGCGCTGG
CAGCAGCCCT GA
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| Protein sequence | MNGNRRVGIL VNRLGSLAVL LALIALWWMA SNAGWVSRVF LPTPQATFAS LLEGLNLRGP
NSNGELLAFT QATVGRMLQG WLLASLFGVL LGAAIGVSPA VRAWVQPTLE FIRPLPASAL
LPLAISIFGL NPGMVLFVVA FGAMWPVLLA TVHGFAAVEP RLAEVARCLQ MSRAAFVWKM
GLPNAMPDIL AGMRLALTIA LIVAVVGEMI ASQSGLGQAI LLAARAFRAS DLFAGIVLLG
LIGFASNALL AFAEKRLLRW QQP
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