Gene RPC_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0846 
Symbol 
ID3969843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp932683 
End bp933450 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID637923962 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_530735 
Protein GI90422365 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.185051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG GGTTGAAGGG CTATGAACGC GCAATCGGGA TCTTGACGCC GCTGGGGTTG 
TTGCTGCTGT GGGAGGCGGC GGGGCGGCTC GGTTTGATCG ACGTGCGGTT CTTTCCGCCG
CCCTCCAGCA TCGTGCATCA GATCGGCGTG CTGATCGCCT CCGGCGAACT GCTCGACAAC
ACGCTGGCGA GCCTGCGGCG GCTGGCGCTC GGCATGTTGC TCGGCGGCGT GCCGGCGCTG
CTGCTGGGGC TGGCGATGGG GATCTCGCGG CCGCTGCGGG TGGCGATCGA TCCGTTGATT
TCGGCGACTT ACCCAATTCC GAAAAGCGCG ATCCTGCCCT TGGTGCTGCT GATCTTCGGG
CTCGGCGAAC TCTCCAAGGT GGTGATGGTG GCGCTCGGCG CGTTCTATCC GATCGTCATC
AACACCATGG TCGGCGTGGT CAATCTCGAT CGGATCTATC TCGACGTCGG GCACAACTTC
CGCGCCAGCC GCTGGCAGGT GTTCCGCACC ATCGCGCTGC CCGGCGCGTT GCCCTCGATC
ATGGCGGGGA TCAAGCTCGC CGCCGGCATG GGGTTGATCC TGATCGCGAT ATCGGAAATG
GTGGCGTCCA ACGACGGCAT CGGATTTATG ATCTGGAACG CCTGGCAGGT GCTGACCGTC
GACACAATGT ATGTTGGGCT CCTGGTGATC GCCATCCTCG GCTTCGTGTT CTCGATCGTG
CTCGACGAGA TCGAACGCCG ACTGATCCCC TGGAAGACCA ACGCATGA
 
Protein sequence
MNRGLKGYER AIGILTPLGL LLLWEAAGRL GLIDVRFFPP PSSIVHQIGV LIASGELLDN 
TLASLRRLAL GMLLGGVPAL LLGLAMGISR PLRVAIDPLI SATYPIPKSA ILPLVLLIFG
LGELSKVVMV ALGAFYPIVI NTMVGVVNLD RIYLDVGHNF RASRWQVFRT IALPGALPSI
MAGIKLAAGM GLILIAISEM VASNDGIGFM IWNAWQVLTV DTMYVGLLVI AILGFVFSIV
LDEIERRLIP WKTNA