Gene Avin_21990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21990 
Symbol 
ID7761117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2197436 
End bp2198257 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID643805084 
ProductABC transporter, inner membrane permease component 
Protein accessionYP_002799365 
Protein GI226944292 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGA GCAAGTCCCC GCCCTTTCGC ACGCCCGCTC CGCTGCCGGC GGGAAAATAT 
CTGCGGCTGC TGGGCAAGCC ATTGTTGCTG GGGCTGCCGT GGGCGGTTCT GCTGGCCCTG
TGGACGGCGG TGCCCCATCT GAGCGAACGC TATGCCGCCC TGGTTCCTTC GCCGGCGAGC
GTGCTGCGCC ACGCGCTGCC GATGCTCGCC GACGGCAGTC TGTTCGTGCA TTGGGCGGCC
TCCGCCTCAA GAGTGATCGG CGGTGTCCTG CTGGGGGTGC TGGCGGCGGT GCCGGTGGGT
TTCGTGCTCG GCTGGTACGC CGGCGCCCGG CGGCTGCTGA CGCCGCTCCT GAACTTTTTC
CGCGCCCTGC CGCCGATCGC GCTGATTCCG CTGACGATCG TCTATTTCGG CATCGGCGAG
GCGGCGAAGA TCCTGGTGCT GGTCTACGCC GCGTTCTTCA CCGCGGTGGT GGTGCTCTAC
GAGGGCATCT CGCGGATCGC GCCGATCTAC GTGAACGTCG CCCGCACCCT GGGCGCCAGC
GAGCGCGAAC TCTTCCTGCG CGTCGTCCTG CCGCTGGCGC TTCCCCATGT ACTGACCGCC
ACCCGCGTGG CGCTCGGCGT GGGCTGGATG ACCCTGGTGG CTTCCGAGCT GGTTTCCGCG
CAGAACGGGC TGGGCTCGAT GATCCAGGTG GCTGCCTCCT ACTTCCAGTT GGAAGTCATC
TACCTGGGGC TGATCTGCAT CGGTTTCACG GCCATGGCCA TGGACTTCCT GCTGGTTCGC
CTGAGCGCCC GGCTGGTCGG CTGGCAGGAA AGGGTGAAGT GA
 
Protein sequence
MSKSKSPPFR TPAPLPAGKY LRLLGKPLLL GLPWAVLLAL WTAVPHLSER YAALVPSPAS 
VLRHALPMLA DGSLFVHWAA SASRVIGGVL LGVLAAVPVG FVLGWYAGAR RLLTPLLNFF
RALPPIALIP LTIVYFGIGE AAKILVLVYA AFFTAVVVLY EGISRIAPIY VNVARTLGAS
ERELFLRVVL PLALPHVLTA TRVALGVGWM TLVASELVSA QNGLGSMIQV AASYFQLEVI
YLGLICIGFT AMAMDFLLVR LSARLVGWQE RVK