Gene Rpal_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2903 
Symbol 
ID6410572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3168527 
End bp3169525 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content63% 
IMG OID642712783 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001991886 
Protein GI192291281 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATG CCATTCAGGC CGCCGGTGAC GAGGCGGTCG TCGGCCGCGT CGGTGCGGTC 
AACGGCCTCT GGCGGGACGG GCTGCTCGCT GCGGCCGCCT GGCTCGCCGC TGCACTCGTC
ACAATCGGGC TGCCTGATGT CGTGCCTTGG GGAAGTGCAT CGCTGTTCGC GTCGATCACG
GCCGGTGTCG CGGCGATATT CCTCGCCCTA TCGGTCACCG TGCATCGGCT CGGACGCGCA
GGGGAGGTGC TGGTCCACTA CGGCCCATGG GTGATCGTCG TCGGTATTTG GCTGGCAATC
TGGGAGTTGA CGACAGCGAA GTTCGGTTGG CTGCCTAAGC CGTTCTTTTC GCCGCCTCAC
GGACTTCTCA ATGTTTACGT CACCGACGGC TCGCGGCTGC TGATCTGCAT CGGCTACACG
CTTCGGCTTT GGGCCTTGGG ATTCCTGTCC GGCATCGTCG TCGGTTACGG CGTCGGCGTC
GCCCTGGGAT GGTCGCGGCG GTTTAGCTAT TGGGGCATGC CGTTGCTGAA GCTGATCGGA
CCGGTTCCGG CGACCGCGTG GATTCCCTGC ACCTTCTACT TCTTTCCCAC CACGTTCGGC
GCGAGCATCT TCATCGTAGC GCTGGCGTCC GGAATTCCGG TGGCGATCCT CACCGCATCG
GGTGTGGGGT CCGTGAACCG CGCCTATTAC GATGTCGGGC GCATTCTCGG CGCGGATAGC
CGCTATCTCA TTCGGCGCGT CGCGATCCCG GCGGCAATGC CCCATGTCTT TGTGGGGCTG
TTCATGGCCT TGTACTATTC CTTCGCCGTT TTGGTCGTGG CGGAGATGCT CGGCGCCAAA
TACGGGCTCG GCTGGTACAT CCAGTTCCAA ACAGCCTATT CGGGCTATGC CAATGTCTAC
GCCGCGCTTC TGATCATGGC GCTGCTCTGC GCCGGGATTA TTCGTCTGCT GTTCGTGGTG
CGAGATCGCC TGTTGAATTG GCAGGAGGGT TTCATCTGA
 
Protein sequence
MTDAIQAAGD EAVVGRVGAV NGLWRDGLLA AAAWLAAALV TIGLPDVVPW GSASLFASIT 
AGVAAIFLAL SVTVHRLGRA GEVLVHYGPW VIVVGIWLAI WELTTAKFGW LPKPFFSPPH
GLLNVYVTDG SRLLICIGYT LRLWALGFLS GIVVGYGVGV ALGWSRRFSY WGMPLLKLIG
PVPATAWIPC TFYFFPTTFG ASIFIVALAS GIPVAILTAS GVGSVNRAYY DVGRILGADS
RYLIRRVAIP AAMPHVFVGL FMALYYSFAV LVVAEMLGAK YGLGWYIQFQ TAYSGYANVY
AALLIMALLC AGIIRLLFVV RDRLLNWQEG FI