Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2903 |
Symbol | |
ID | 6410572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3168527 |
End bp | 3169525 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642712783 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001991886 |
Protein GI | 192291281 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG CCATTCAGGC CGCCGGTGAC GAGGCGGTCG TCGGCCGCGT CGGTGCGGTC AACGGCCTCT GGCGGGACGG GCTGCTCGCT GCGGCCGCCT GGCTCGCCGC TGCACTCGTC ACAATCGGGC TGCCTGATGT CGTGCCTTGG GGAAGTGCAT CGCTGTTCGC GTCGATCACG GCCGGTGTCG CGGCGATATT CCTCGCCCTA TCGGTCACCG TGCATCGGCT CGGACGCGCA GGGGAGGTGC TGGTCCACTA CGGCCCATGG GTGATCGTCG TCGGTATTTG GCTGGCAATC TGGGAGTTGA CGACAGCGAA GTTCGGTTGG CTGCCTAAGC CGTTCTTTTC GCCGCCTCAC GGACTTCTCA ATGTTTACGT CACCGACGGC TCGCGGCTGC TGATCTGCAT CGGCTACACG CTTCGGCTTT GGGCCTTGGG ATTCCTGTCC GGCATCGTCG TCGGTTACGG CGTCGGCGTC GCCCTGGGAT GGTCGCGGCG GTTTAGCTAT TGGGGCATGC CGTTGCTGAA GCTGATCGGA CCGGTTCCGG CGACCGCGTG GATTCCCTGC ACCTTCTACT TCTTTCCCAC CACGTTCGGC GCGAGCATCT TCATCGTAGC GCTGGCGTCC GGAATTCCGG TGGCGATCCT CACCGCATCG GGTGTGGGGT CCGTGAACCG CGCCTATTAC GATGTCGGGC GCATTCTCGG CGCGGATAGC CGCTATCTCA TTCGGCGCGT CGCGATCCCG GCGGCAATGC CCCATGTCTT TGTGGGGCTG TTCATGGCCT TGTACTATTC CTTCGCCGTT TTGGTCGTGG CGGAGATGCT CGGCGCCAAA TACGGGCTCG GCTGGTACAT CCAGTTCCAA ACAGCCTATT CGGGCTATGC CAATGTCTAC GCCGCGCTTC TGATCATGGC GCTGCTCTGC GCCGGGATTA TTCGTCTGCT GTTCGTGGTG CGAGATCGCC TGTTGAATTG GCAGGAGGGT TTCATCTGA
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Protein sequence | MTDAIQAAGD EAVVGRVGAV NGLWRDGLLA AAAWLAAALV TIGLPDVVPW GSASLFASIT AGVAAIFLAL SVTVHRLGRA GEVLVHYGPW VIVVGIWLAI WELTTAKFGW LPKPFFSPPH GLLNVYVTDG SRLLICIGYT LRLWALGFLS GIVVGYGVGV ALGWSRRFSY WGMPLLKLIG PVPATAWIPC TFYFFPTTFG ASIFIVALAS GIPVAILTAS GVGSVNRAYY DVGRILGADS RYLIRRVAIP AAMPHVFVGL FMALYYSFAV LVVAEMLGAK YGLGWYIQFQ TAYSGYANVY AALLIMALLC AGIIRLLFVV RDRLLNWQEG FI
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