More than 300 homologs were found in PanDaTox collection
for query gene Bind_2058 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_2058  binding-protein-dependent transport systems inner membrane component  100 
 
 
348 aa  675    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.911629  normal 
 
 
-
 
NC_009720  Xaut_2776  binding-protein-dependent transport systems inner membrane component  60.82 
 
 
352 aa  343  2.9999999999999997e-93  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2672  binding-protein-dependent transport systems inner membrane component  63.39 
 
 
346 aa  337  9.999999999999999e-92  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007973  Rmet_2220  binding-protein-dependent transport systems inner membrane component  56.11 
 
 
347 aa  328  1.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00146165  normal  0.277213 
 
 
-
 
NC_012791  Vapar_3868  binding-protein-dependent transport systems inner membrane component  54.01 
 
 
360 aa  321  1.9999999999999998e-86  Variovorax paradoxus S110  Bacteria  normal  0.753162  n/a   
 
 
-
 
NC_011004  Rpal_2687  binding-protein-dependent transport systems inner membrane component  63.32 
 
 
342 aa  316  3e-85  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4838  binding-protein-dependent transport systems inner membrane component  70.73 
 
 
334 aa  316  3e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4458  binding-protein-dependent transport systems inner membrane component  54.13 
 
 
345 aa  313  2.9999999999999996e-84  Ralstonia pickettii 12J  Bacteria  normal  0.0470416  normal  0.49714 
 
 
-
 
NC_012857  Rpic12D_4592  binding-protein-dependent transport systems inner membrane component  54.13 
 
 
345 aa  313  2.9999999999999996e-84  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_5011  binding-protein-dependent transport systems inner membrane component  62.6 
 
 
331 aa  310  2e-83  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4337  binding-protein-dependent transport systems inner membrane component  61.79 
 
 
363 aa  308  9e-83  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.638266 
 
 
-
 
NC_008061  Bcen_4113  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
365 aa  308  1.0000000000000001e-82  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.18641  n/a   
 
 
-
 
NC_008543  Bcen2424_4253  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
365 aa  308  1.0000000000000001e-82  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0124034  normal  0.0867755 
 
 
-
 
NC_010515  Bcenmc03_3264  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
365 aa  307  2.0000000000000002e-82  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.657095  normal 
 
 
-
 
NC_010172  Mext_1168  binding-protein-dependent transport systems inner membrane component  68.27 
 
 
332 aa  305  7e-82  Methylobacterium extorquens PA1  Bacteria  normal  0.811206  normal  0.0956624 
 
 
-
 
NC_011757  Mchl_1328  binding-protein-dependent transport systems inner membrane component  68.27 
 
 
332 aa  305  7e-82  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.46412  normal  0.348688 
 
 
-
 
NC_010725  Mpop_4900  binding-protein-dependent transport systems inner membrane component  69.08 
 
 
333 aa  304  1.0000000000000001e-81  Methylobacterium populi BJ001  Bacteria  normal  0.572728  normal 
 
 
-
 
NC_010552  BamMC406_4150  binding-protein-dependent transport systems inner membrane component  60.16 
 
 
363 aa  303  2.0000000000000002e-81  Burkholderia ambifaria MC40-6  Bacteria  normal  0.901317  normal  0.0679458 
 
 
-
 
NC_012560  Avin_31120  ABC transporter permease protein  66.96 
 
 
331 aa  303  4.0000000000000003e-81  Azotobacter vinelandii DJ  Bacteria  normal  0.848336  n/a   
 
 
-
 
NC_008391  Bamb_3677  binding-protein-dependent transport systems inner membrane component  59.76 
 
 
363 aa  301  9e-81  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.959373 
 
 
-
 
NC_007951  Bxe_A2163  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  55.12 
 
 
353 aa  296  3e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0115  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  65.06 
 
 
352 aa  295  9e-79  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1758  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  56.4 
 
 
364 aa  295  1e-78  Burkholderia sp. 383  Bacteria  normal  0.351017  normal  0.0158469 
 
 
-
 
NC_010322  PputGB1_3268  binding-protein-dependent transport systems inner membrane component  67.1 
 
 
331 aa  292  7e-78  Pseudomonas putida GB-1  Bacteria  normal  normal  0.478821 
 
 
-
 
NC_009485  BBta_2517  putative alkanesulfonate ABC transporter, permease protein  55.07 
 
 
334 aa  283  3.0000000000000004e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.562769 
 
 
-
 
NC_011365  Gdia_0858  binding-protein-dependent transport systems inner membrane component  56.41 
 
 
331 aa  283  4.0000000000000003e-75  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.124749  normal 
 
 
-
 
NC_010002  Daci_5618  binding-protein-dependent transport systems inner membrane component  63.95 
 
 
351 aa  274  1.0000000000000001e-72  Delftia acidovorans SPH-1  Bacteria  normal  0.447889  normal  0.316795 
 
 
-
 
NC_009485  BBta_2515  putative alkanesulfonate ABC transporter, permease protein  46.28 
 
 
337 aa  251  1e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.979433  normal 
 
 
-
 
NC_011004  Rpal_2903  binding-protein-dependent transport systems inner membrane component  47.24 
 
 
332 aa  244  9.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1357  binding-protein-dependent transport systems inner membrane component  39.78 
 
 
338 aa  202  9.999999999999999e-51  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1918  binding-protein-dependent transport systems inner membrane component  40.56 
 
 
340 aa  192  5e-48  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1571  binding-protein-dependent transport systems inner membrane component  38.85 
 
 
355 aa  184  2.0000000000000003e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0527  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
342 aa  182  5.0000000000000004e-45  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
277 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_013510  Tcur_1455  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
269 aa  117  3e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0865715  n/a   
 
 
-
 
NC_009012  Cthe_2791  binding-protein-dependent transport systems inner membrane component  28.82 
 
 
302 aa  116  6e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  31.22 
 
 
266 aa  114  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
273 aa  114  2.0000000000000002e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
274 aa  112  8.000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_0213  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
252 aa  112  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  30.15 
 
 
271 aa  111  2.0000000000000002e-23  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_007604  Synpcc7942_1238  nitrate transport permease  31.96 
 
 
279 aa  111  2.0000000000000002e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
283 aa  111  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
273 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_007925  RPC_0846  binding-protein-dependent transport systems inner membrane component  27.9 
 
 
255 aa  109  6e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.185051 
 
 
-
 
NC_009485  BBta_1369  ABC transporter membrane protein  30.36 
 
 
272 aa  109  6e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0458182 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  33.99 
 
 
260 aa  109  8.000000000000001e-23  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
273 aa  109  9.000000000000001e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
273 aa  109  9.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  33.81 
 
 
274 aa  108  1e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
288 aa  108  1e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  31.84 
 
 
311 aa  107  2e-22  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_013159  Svir_34320  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.27 
 
 
273 aa  107  3e-22  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
277 aa  107  3e-22  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  29.96 
 
 
306 aa  107  4e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_007348  Reut_B5801  binding-protein dependent transport system inner membrane protein  33.76 
 
 
290 aa  106  5e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
277 aa  106  5e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_009712  Mboo_0163  binding-protein-dependent transport systems inner membrane component  32.31 
 
 
310 aa  105  8e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  30.34 
 
 
279 aa  105  1e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  30.04 
 
 
278 aa  105  1e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  32.02 
 
 
269 aa  105  1e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009485  BBta_2819  nitrate transport permease protein (nrtB)  29.92 
 
 
304 aa  105  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.233469  normal 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  30.08 
 
 
285 aa  104  3e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  30.34 
 
 
252 aa  104  3e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  29.72 
 
 
280 aa  104  3e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_009485  BBta_2535  putative taurine ABC transporter, permease protein  33.47 
 
 
282 aa  103  4e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.254862  normal 
 
 
-
 
NC_008825  Mpe_A1391  NO3-/NO2- ABC transporter  30.49 
 
 
305 aa  103  4e-21  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.36361 
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  30.41 
 
 
277 aa  103  5e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  29.26 
 
 
273 aa  103  5e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  29.57 
 
 
279 aa  103  6e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
NC_013131  Caci_4306  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
278 aa  102  1e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0649738  hitchhiker  0.00238236 
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
314 aa  101  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1026  nitrate transport permease  29.36 
 
 
279 aa  101  2e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.174596 
 
 
-
 
NC_013757  Gobs_2479  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
258 aa  101  2e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0520  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
265 aa  100  3e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.231998 
 
 
-
 
NC_007520  Tcr_0034  binding-protein dependent transport system inner membrane protein  33.33 
 
 
276 aa  100  3e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  28.91 
 
 
319 aa  100  3e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_013595  Sros_8275  ABC-type transporter, permease protein  32.64 
 
 
272 aa  100  3e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.144641 
 
 
-
 
NC_009720  Xaut_3459  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
283 aa  100  3e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  0.703735  normal 
 
 
-
 
NC_007947  Mfla_0326  nitrate transport permease  31.35 
 
 
295 aa  100  4e-20  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
269 aa  100  4e-20  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
302 aa  99.8  6e-20  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
275 aa  99.8  6e-20  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1439  nitrate ABC transporter, inner membrane subunit  28.86 
 
 
310 aa  99.8  6e-20  Dickeya zeae Ech1591  Bacteria  normal  0.062597  n/a   
 
 
-
 
NC_007777  Francci3_0250  binding-protein-dependent transport systems inner membrane component  30.13 
 
 
280 aa  99.8  6e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  27.94 
 
 
254 aa  99.8  6e-20  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010524  Lcho_3842  nitrate ABC transporter, inner membrane subunit  32.37 
 
 
331 aa  99.8  6e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009832  Spro_4564  taurine transporter subunit  30.19 
 
 
279 aa  99.4  7e-20  Serratia proteamaculans 568  Bacteria  normal  normal  0.746145 
 
 
-
 
NC_007604  Synpcc7942_2106  nitrate transport permease  32.04 
 
 
263 aa  99.8  7e-20  Synechococcus elongatus PCC 7942  Bacteria  normal  0.727969  normal 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
266 aa  99.8  7e-20  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A1031  sulfonate ABC transporter, permease protein  33.54 
 
 
261 aa  98.6  1e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  39.5 
 
 
269 aa  98.6  1e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4495  nitrate ABC transporter, inner membrane subunit  28.91 
 
 
285 aa  99  1e-19  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0966  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
279 aa  99  1e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.136509 
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  39.17 
 
 
269 aa  98.6  1e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2146  nitrate ABC transporter, inner membrane subunit  30 
 
 
315 aa  99  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
269 aa  98.6  1e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4958  nitrate ABC transporter, inner membrane subunit  28.91 
 
 
285 aa  98.6  1e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.413837  normal  0.165118 
 
 
-
 
NC_010725  Mpop_3868  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
285 aa  98.2  2e-19  Methylobacterium populi BJ001  Bacteria  normal  normal  0.03471 
 
 
-
 
NC_009436  Ent638_2324  nitrate ABC transporter, inner membrane subunit  30.65 
 
 
293 aa  98.2  2e-19  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
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