Gene Mchl_4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4958 
Symbol 
ID7114955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5293309 
End bp5294166 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID643527651 
Productnitrate ABC transporter, inner membrane subunit 
Protein accessionYP_002423651 
Protein GI218532835 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID[TIGR01183] nitrate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.165118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG GAGCAACGCT CACCGCAACC CGCGAACGCG CCGCCAAGGC CCGCACGCCC 
TTCATCACCA TGGCTGGGCT GCGCGGCGTT GCCGCCCGCG TCCTGCCGCC GCTCGTCGTC
CTGGCGGGCT TCCTGCTCCT GTGGGAGGTG CTGTGCTCCT CCCCCACCGC CGGCCTGCCG
CCGCCCTCGC GGGTGATGAC GGAAGCCTGG GACATCATCA TTGACCCGTT CTACGACAAC
GGCGGCACCG ACAAGGGCCT GTTCTGGCAT ATCGCCGCGA GCCTGAAGCG CGTGGCGCTG
GGCTTCTCGC TGGCGGTGGT GGCGGGCGTG ATGCTCGGCA CGCTGGTCGG CCAGTCCGAC
TGGGCGATGC GCGGGCTCGA CCCGATCTTC CAGATCCTGC GCACGATCCC GCCGCTGGCG
TGGCTCCCGC TCTCGCTCGC CGCCTTCCGC GACGGCCAAC CGAGCGCGAT CTTCGTGATC
TTCATCACCT CGATCTGGCC GATCATCATC AACACCGCGG TCGGCATTCG CAACATTCCG
CAAGACTACC GCAACGTCGC CGCGGTCATC CGGCTGAACC CGATCGAGTT CTTCGTGAAG
ATCATGCTGC CCTCGGCGGC CCCCTACATC TTCACCGGTC TTCGCATCGG CGTCGGCCTG
TCCTGGCTCG CCATCGTCGC GGCCGAAATG CTGATCGGCG GCGTCGGGAT CGGCTTCTTC
ATCTGGGATG CGTGGAACTC GTCGCACATC TCCGAGATCA TCGTCGCCCT CGTCTATGTC
GGGCTCATCG GCTTCGTCCT CGACCGGATG GTCGCCGGGC TCGGCGTGCT CGTGACCCGC
GGCACCAGCG CAGCGTGA
 
Protein sequence
MATGATLTAT RERAAKARTP FITMAGLRGV AARVLPPLVV LAGFLLLWEV LCSSPTAGLP 
PPSRVMTEAW DIIIDPFYDN GGTDKGLFWH IAASLKRVAL GFSLAVVAGV MLGTLVGQSD
WAMRGLDPIF QILRTIPPLA WLPLSLAAFR DGQPSAIFVI FITSIWPIII NTAVGIRNIP
QDYRNVAAVI RLNPIEFFVK IMLPSAAPYI FTGLRIGVGL SWLAIVAAEM LIGGVGIGFF
IWDAWNSSHI SEIIVALVYV GLIGFVLDRM VAGLGVLVTR GTSAA