| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3868 |
|---|
| Symbol | |
|---|
| ID | 6312336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4112615 |
|---|
| End bp | 4113472 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642652570 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001926530 |
|---|
| Protein GI | 188583085 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.03471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGGG GCGTGACCGA GGCGGCCCTC GCCGTCGCGC GCGCGGTCGC GGCACCGCAT
CCGCGTCGCG CCGGGACGGG TGCCCGGCTC GGTGCTTCTG CCGTCAACCG GCTGGCCCCG
CTCCTCGGCC TCGCGGGGCT CCTCGCCCTG TGGTTCGCGG GCGGGCTGGT TCTGGAGAGC
GTGCCGGCCT ACGCCGCCTT CGCCGGGTTC GCGCCGGGGC CTGCCCTCGC CTCCTTCGCC
GAGCTGATCG CCTCCGGCGA GGCGTGGCGG GCGGCCGCGC CGAGCCTCGC CCGGATCGGC
CAGGGCCTCG CGGCCGCGTT TCTGCTCGGC GCGCCGCTCG GGCTGCTGGT CGGCTCGGCG
CCGCTGGCCG AACGCATCCT GCAGCCGCCG TTCCAGCTCC TGCGGATGAT CTCGCCGCTG
GCCTGGATGC CGGTGGCGGT GCTCGCTTTC CCGAGCTGGG ACGGGGCCAT CGTCTTCCTG
ATCGCGGCGG CTGCGATCTG GCCGATCCTG TTCTCCACCG CCGCCGGGGT GAAGCGGGTC
GATCCGGTCT GGCTCGCCAT GGCGCGCAAC CTCGGCGCCG GCCGGCTCGC GGCGTTGCGC
GCCGTCATCG TCCCGGCGGT GCTGCAGGAC ATCCTCACCG GCCTGCGCCT TGCGCTGGGC
GTCGCCTGGA TCGTCCTGGT GCCGGCCGAG TATCTCGGGG TCACGAGCGG GCTCGGCTAC
GCCATCAACG ACGCCCGCGA CACCCTCTCC TACGACCGGC TCGCCGCCCT CGTCCTGCTG
ATCGGTTTGA TCGGCTACGC CCTCGACAGC GTGCTCGGGC GGCTCGCCGC CCGCGCCCGC
TGGATTCCCA CCAGTTGA
|
|---|
| Protein sequence | MSGGVTEAAL AVARAVAAPH PRRAGTGARL GASAVNRLAP LLGLAGLLAL WFAGGLVLES
VPAYAAFAGF APGPALASFA ELIASGEAWR AAAPSLARIG QGLAAAFLLG APLGLLVGSA
PLAERILQPP FQLLRMISPL AWMPVAVLAF PSWDGAIVFL IAAAAIWPIL FSTAAGVKRV
DPVWLAMARN LGAGRLAALR AVIVPAVLQD ILTGLRLALG VAWIVLVPAE YLGVTSGLGY
AINDARDTLS YDRLAALVLL IGLIGYALDS VLGRLAARAR WIPTS
|
|---|
| |