| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4937 |
|---|
| Symbol | |
|---|
| ID | 9248824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 74541 |
|---|
| End bp | 75404 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003682826 |
|---|
| Protein GI | 297563853 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0773955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA CGCTGACCCG CTCGGCGGGC ACCGCCTCCT CCGACGCCTC CTCCCCGGCG
GCGCCGGGCA CGGGCGGACC TCCCCCCGCG CTCACGGCCG CGCTCCGGCT GGCCTGGCTC
TGCTTCAAGC GCTCGGCCGT CATCGCGGCC TTCCTCCTGC TGTGGGAGGT GGCGCCGAGG
GTCGGCCTCC TCGACCGGGT GTTCCTGCCC CCGCTGACCG AGGTCCTGGC CGCGACGCGG
GACCTGGCCC TGAGCGGACA GCTGTGGAAC CACGTGTCCG CCAGCCTCGC CCGCGCCCTG
AGCGGCTTCC TCGTCGCCGT GGCCGCCGCC GTGCCGCTGG GCGTCCTCAT CGCCTGGTAC
CGGCCGGTAT CGGACTTCCT CACGCCGATC CTGGAGCTGT TCCGCAACAC CGCGGCCCTG
GCCCTGCTGC CGGTGTTCGT GCTCGTCCTG GGGATCGGCG AGGCCTCCAA GGTCTCCCTG
GTGGTCTACG CGTGCGCCTT CCCGGTCCTG CTCAACACCA TCACCGGGGT CCGGACCGTC
GACCCCCTGC TCGTCAAGTC GGCGGCCTCC CTGGGGTTCG GGCCGCTCGC GCTGTTCCGC
AAGGTGGTGC TGCCCGCCTC GGTCCCGTCG ATCTTCACCG GCGTGCGCAT GGCCGGGGCC
TCCTCGATCC TCGTGCTCAT CGCCGCGGAG ATGGTCGGCT CCCAGTCGGG CCTGGGCTAC
CTCGTCAACG CCGCCCAGCT CAACTTCCTC ATCCACGACA TGTACGCGGG AATCCTGGCC
ATCGCCGTGG TGGGGGTGGC CCTCAACGGC GTCCTCGTCG CGCTCGAACG GCGCTTCTCC
CGCTGGCGCA CGACCGAGCG GTGA
|
|---|
| Protein sequence | MADTLTRSAG TASSDASSPA APGTGGPPPA LTAALRLAWL CFKRSAVIAA FLLLWEVAPR
VGLLDRVFLP PLTEVLAATR DLALSGQLWN HVSASLARAL SGFLVAVAAA VPLGVLIAWY
RPVSDFLTPI LELFRNTAAL ALLPVFVLVL GIGEASKVSL VVYACAFPVL LNTITGVRTV
DPLLVKSAAS LGFGPLALFR KVVLPASVPS IFTGVRMAGA SSILVLIAAE MVGSQSGLGY
LVNAAQLNFL IHDMYAGILA IAVVGVALNG VLVALERRFS RWRTTER
|
|---|
| |