| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2104 |
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| Symbol | |
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| ID | 5109838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2333535 |
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| End bp | 2334386 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503348 |
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| Product | nitrate ABC transporter, inner membrane subunit |
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| Protein accession | YP_001187597 |
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| Protein GI | 146307132 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0291571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0240092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGC CCCTGAAAAC GCCATTACCC CCAGTCGCCA AACCGCGCGC GAGCCTTGCG
ACGTGGCTAC CCGACGCGCA AATCCTCGCC ACGCTGTTCA AGGCCAGCAT CGCTCCGCTG
CTGGGCATCC TCGCCTTCAT CGGCTTCTGG TCGCTGCTGG CGCAGTACAG CGAGGGCCTG
CCCGGGCCTT TGAGCACCTG GCAGGCCGCC CTGGTGCTGT TCGCCGATCC TTTCTACGAC
AACGGCCCCA ACGACATGGG CATCGGCTGG AACATCCTCA ATTCGCTCGG CCGCGTCGGC
GTCGGCTTCG GCCTCGCCGC GCTGGTGGGC ATTCCCCTGG GCTTCGCCAT CGGCCGCTTT
GCGTTTTTGG CCGGCATGCT GGCACCGATC ATCAGCCTGT TGCGCCCGGT CTCGCCGCTG
GCCTGGCTGC CGATCGGCCT GCTGGTGTTC GAGGCGGCCG GCCCGGCGTC GATCTGGGTG
ATCTTCATCA GCTCGATCTG GCCAATCATC CTCAATACCG CCGCCGGCGT AGCCAGCGTG
CCCCAGGACT ACCTGAACGT GGCCCGCGTG CTCAAGCTGT CGGAGTTCAA GGTGCTGACG
CGCATCCTGT TTCCCGCCGT GCTGCCGCAC CTGATGACCG GCATCCGCCT GGCCATCGGC
GTGGCCTGGC TGGTGATCGT GGCCGCGGAG ATGCTCACCG GCGGCATCGG CCTGGGTTTC
TGGGTGTGGG ATGAATGGAA CAACCTCAAC GTCGAGCACA TTCTCATCGC CATCATCATC
GTCGGCCTGG TGGGCCTGGC GCTGGAGCAG ACGCTGCTGC TGATCGCCAG GCGTTTCGAC
TACGCAAGCT GA
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| Protein sequence | MNAPLKTPLP PVAKPRASLA TWLPDAQILA TLFKASIAPL LGILAFIGFW SLLAQYSEGL
PGPLSTWQAA LVLFADPFYD NGPNDMGIGW NILNSLGRVG VGFGLAALVG IPLGFAIGRF
AFLAGMLAPI ISLLRPVSPL AWLPIGLLVF EAAGPASIWV IFISSIWPII LNTAAGVASV
PQDYLNVARV LKLSEFKVLT RILFPAVLPH LMTGIRLAIG VAWLVIVAAE MLTGGIGLGF
WVWDEWNNLN VEHILIAIII VGLVGLALEQ TLLLIARRFD YAS
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