Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5422 |
Symbol | |
ID | 8329624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6441244 |
End bp | 6442053 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945859 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003103087 |
Protein GI | 256379427 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGGCGC TGTCGGGCTT CCTCCAGCGG TGGGTGGTCT TCGGCTGCCT GGTCCTGGTG TGGGAGGTGG CGGCGTTCCT CGCGGACGAC CCGTTCTTCC CGCGCCCCAC GGTGATCGCG GAAGCCGCCG CGGAGCTGTG GCTCAGCGGC CCCGCCGAGA CGCTGTTCCT GAGCGACGTG GTGTTCGAGC ACCTGGTGCC CAGCCTGACC CGGCTGCTCA CCGGGTGGGG CATCGCCGCC GTCGTCGGCG TCGCGCTCGG CCTCGCCCTC GGCCGCTCCG CGCGCGCCAT GGAGTACGCG GGGCCGGTGC TGACGTTCAT GCGCTCCATC CCGCCGCCCG CGCTGGTGCC GGTGTTCCTG CTGCTGTTCA ACATCGGCAC CTCGATGCAG CTGGCCACGA TCGTCTTCGG CGTGCTGTGG CCGATCCTGC TCAACACCGT CGACGGCGCC CGCTCCGTCG ACAGCACCAA GACCGAGACG TCCGAGGTGT TCCGCATCCC GCGCGCCCAG TGGGTCCTCG GCGTCGTCCT GCCGTCGGCC GCCCCGAAGA TCTTCGCCGG TCTCCGGGTC AGCCTGTCGC TGTCGCTCGT GCTCATGGTC GTCTCCGAGC TCGTCGGCAC CGACAACGGC ATCGGCTCGC AGCTGCTGCT CGCCCAGCGG CAGTTCGACT TCCCCGGCAT GTGGGCGGGG ATCGTCCTGC TCGGCGTGCT CGGCTACACC CTCAACACCG TGCTCCTCGC GCTGGAGAAC CGGGCGCTGG CCTGGCAGCC CAAGCGCGAG GGGCGCACCC CCGCGACGGT GGAGGATTGA
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Protein sequence | MRALSGFLQR WVVFGCLVLV WEVAAFLADD PFFPRPTVIA EAAAELWLSG PAETLFLSDV VFEHLVPSLT RLLTGWGIAA VVGVALGLAL GRSARAMEYA GPVLTFMRSI PPPALVPVFL LLFNIGTSMQ LATIVFGVLW PILLNTVDGA RSVDSTKTET SEVFRIPRAQ WVLGVVLPSA APKIFAGLRV SLSLSLVLMV VSELVGTDNG IGSQLLLAQR QFDFPGMWAG IVLLGVLGYT LNTVLLALEN RALAWQPKRE GRTPATVED
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