Gene Amir_5422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5422 
Symbol 
ID8329624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6441244 
End bp6442053 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID644945859 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003103087 
Protein GI256379427 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGCGC TGTCGGGCTT CCTCCAGCGG TGGGTGGTCT TCGGCTGCCT GGTCCTGGTG 
TGGGAGGTGG CGGCGTTCCT CGCGGACGAC CCGTTCTTCC CGCGCCCCAC GGTGATCGCG
GAAGCCGCCG CGGAGCTGTG GCTCAGCGGC CCCGCCGAGA CGCTGTTCCT GAGCGACGTG
GTGTTCGAGC ACCTGGTGCC CAGCCTGACC CGGCTGCTCA CCGGGTGGGG CATCGCCGCC
GTCGTCGGCG TCGCGCTCGG CCTCGCCCTC GGCCGCTCCG CGCGCGCCAT GGAGTACGCG
GGGCCGGTGC TGACGTTCAT GCGCTCCATC CCGCCGCCCG CGCTGGTGCC GGTGTTCCTG
CTGCTGTTCA ACATCGGCAC CTCGATGCAG CTGGCCACGA TCGTCTTCGG CGTGCTGTGG
CCGATCCTGC TCAACACCGT CGACGGCGCC CGCTCCGTCG ACAGCACCAA GACCGAGACG
TCCGAGGTGT TCCGCATCCC GCGCGCCCAG TGGGTCCTCG GCGTCGTCCT GCCGTCGGCC
GCCCCGAAGA TCTTCGCCGG TCTCCGGGTC AGCCTGTCGC TGTCGCTCGT GCTCATGGTC
GTCTCCGAGC TCGTCGGCAC CGACAACGGC ATCGGCTCGC AGCTGCTGCT CGCCCAGCGG
CAGTTCGACT TCCCCGGCAT GTGGGCGGGG ATCGTCCTGC TCGGCGTGCT CGGCTACACC
CTCAACACCG TGCTCCTCGC GCTGGAGAAC CGGGCGCTGG CCTGGCAGCC CAAGCGCGAG
GGGCGCACCC CCGCGACGGT GGAGGATTGA
 
Protein sequence
MRALSGFLQR WVVFGCLVLV WEVAAFLADD PFFPRPTVIA EAAAELWLSG PAETLFLSDV 
VFEHLVPSLT RLLTGWGIAA VVGVALGLAL GRSARAMEYA GPVLTFMRSI PPPALVPVFL
LLFNIGTSMQ LATIVFGVLW PILLNTVDGA RSVDSTKTET SEVFRIPRAQ WVLGVVLPSA
APKIFAGLRV SLSLSLVLMV VSELVGTDNG IGSQLLLAQR QFDFPGMWAG IVLLGVLGYT
LNTVLLALEN RALAWQPKRE GRTPATVED