Gene Sros_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1818 
Symbol 
ID8665096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1940747 
End bp1941538 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter, permease protein 
Protein accessionYP_003337550 
Protein GI271963354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.493092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG TCCTGCGCGC CGCCGGCCGC CTGTGGGCGG TGCCGGTGGT GCTGGTGGTC 
TGGGAGCTCG TCACCCGCGC CGCGGAGAAT CTCTCCTTCC CGCCGCCGAC GACGATCGCC
GCGAGCATGT ACGAGATGTG GCTGACCGGC CCGGCCGAGC GGCTGTGGCT CACCGACGCG
GCGCTGGAGA ACATCCCGGC GAGCATCGGC CGGCTGCTGG CCGGATGGGT GCTGGCCGGA
GTGATCGGGA CCGCCGTCGG GCTCGTTCTG GGCCGCCGGC CGCTGTACTT CCGGTTCGTG
GACCCGCTCG TGCAGTTCGC CCGCGCCATC CCCCCGCCCA TGCTGCTGCC GTTCTTCATG
GCGCTGTTCG CCATCGGCCC GCAGATGCAG ATCAACGTGA TCGTGTTCGG CATCATCTGG
CCGGTGCTGA TCAACGCGGC CGAAGGGGCC CGGCACATCG ACCGCCAGTA CGTGGACACC
GCCAGGGTCT TCGGGCTGTC GCTCAAGCAG CGGCTGTTCC TGCTCGTCCT CCCCGCGGCG
ATGCCGAAGA TCTTCGCCGG TCTGCGGGTC AGCCTGTCCC TGGCGTTGAT CCTGATGGTC
ATCTCCGAGC TGGTGGGCAG CACCGACGGG ATCGGCTTCC AGCTCCTGGA CGCCCAGAGG
TCTTACGACC TCCCCGGCGT GTGGGGGACC ATCGTGGTAC TCGGTGTCCT GGGATATGTG
CTCAACTCGG CGTTCCTCGC GGCCGAACGA CGCGTCCTGT CCTGGCACCG GACCGCCAAG
CAGACGACCT GA
 
Protein sequence
MNRVLRAAGR LWAVPVVLVV WELVTRAAEN LSFPPPTTIA ASMYEMWLTG PAERLWLTDA 
ALENIPASIG RLLAGWVLAG VIGTAVGLVL GRRPLYFRFV DPLVQFARAI PPPMLLPFFM
ALFAIGPQMQ INVIVFGIIW PVLINAAEGA RHIDRQYVDT ARVFGLSLKQ RLFLLVLPAA
MPKIFAGLRV SLSLALILMV ISELVGSTDG IGFQLLDAQR SYDLPGVWGT IVVLGVLGYV
LNSAFLAAER RVLSWHRTAK QTT