Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1818 |
Symbol | |
ID | 8665096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1940747 |
End bp | 1941538 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter, permease protein |
Protein accession | YP_003337550 |
Protein GI | 271963354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.493092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCG TCCTGCGCGC CGCCGGCCGC CTGTGGGCGG TGCCGGTGGT GCTGGTGGTC TGGGAGCTCG TCACCCGCGC CGCGGAGAAT CTCTCCTTCC CGCCGCCGAC GACGATCGCC GCGAGCATGT ACGAGATGTG GCTGACCGGC CCGGCCGAGC GGCTGTGGCT CACCGACGCG GCGCTGGAGA ACATCCCGGC GAGCATCGGC CGGCTGCTGG CCGGATGGGT GCTGGCCGGA GTGATCGGGA CCGCCGTCGG GCTCGTTCTG GGCCGCCGGC CGCTGTACTT CCGGTTCGTG GACCCGCTCG TGCAGTTCGC CCGCGCCATC CCCCCGCCCA TGCTGCTGCC GTTCTTCATG GCGCTGTTCG CCATCGGCCC GCAGATGCAG ATCAACGTGA TCGTGTTCGG CATCATCTGG CCGGTGCTGA TCAACGCGGC CGAAGGGGCC CGGCACATCG ACCGCCAGTA CGTGGACACC GCCAGGGTCT TCGGGCTGTC GCTCAAGCAG CGGCTGTTCC TGCTCGTCCT CCCCGCGGCG ATGCCGAAGA TCTTCGCCGG TCTGCGGGTC AGCCTGTCCC TGGCGTTGAT CCTGATGGTC ATCTCCGAGC TGGTGGGCAG CACCGACGGG ATCGGCTTCC AGCTCCTGGA CGCCCAGAGG TCTTACGACC TCCCCGGCGT GTGGGGGACC ATCGTGGTAC TCGGTGTCCT GGGATATGTG CTCAACTCGG CGTTCCTCGC GGCCGAACGA CGCGTCCTGT CCTGGCACCG GACCGCCAAG CAGACGACCT GA
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Protein sequence | MNRVLRAAGR LWAVPVVLVV WELVTRAAEN LSFPPPTTIA ASMYEMWLTG PAERLWLTDA ALENIPASIG RLLAGWVLAG VIGTAVGLVL GRRPLYFRFV DPLVQFARAI PPPMLLPFFM ALFAIGPQMQ INVIVFGIIW PVLINAAEGA RHIDRQYVDT ARVFGLSLKQ RLFLLVLPAA MPKIFAGLRV SLSLALILMV ISELVGSTDG IGFQLLDAQR SYDLPGVWGT IVVLGVLGYV LNSAFLAAER RVLSWHRTAK QTT
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