More than 300 homologs were found in PanDaTox collection
for query gene GYMC61_1579 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_1579  putative transcriptional regulator, Crp/Fnr family  100 
 
 
136 aa  282  9e-76  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  50.39 
 
 
230 aa  144  5e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  50.39 
 
 
230 aa  144  5e-34  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  50.39 
 
 
230 aa  144  5e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  49.61 
 
 
230 aa  142  1e-33  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  50.39 
 
 
230 aa  142  1e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  49.61 
 
 
226 aa  142  2e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  50.39 
 
 
230 aa  142  2e-33  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  50.39 
 
 
230 aa  142  2e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  49.61 
 
 
230 aa  139  9.999999999999999e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  48.84 
 
 
230 aa  137  4.999999999999999e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  50.88 
 
 
228 aa  129  2.0000000000000002e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  34.33 
 
 
243 aa  75.1  0.0000000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.3 
 
 
225 aa  72.8  0.000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  31.3 
 
 
225 aa  72.8  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  32.8 
 
 
225 aa  72  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  30.65 
 
 
226 aa  69.7  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  32.46 
 
 
224 aa  68.9  0.00000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.43 
 
 
225 aa  67.8  0.00000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  33.08 
 
 
226 aa  67  0.00000000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  29.51 
 
 
220 aa  65.5  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  31.86 
 
 
231 aa  65.9  0.0000000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30.16 
 
 
228 aa  65.1  0.0000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.69 
 
 
225 aa  65.1  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  32.33 
 
 
226 aa  64.7  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  30.65 
 
 
228 aa  64.7  0.0000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  25.81 
 
 
225 aa  64.3  0.0000000005  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.04 
 
 
242 aa  64.3  0.0000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  29.03 
 
 
226 aa  63.9  0.0000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  30.97 
 
 
225 aa  63.9  0.0000000007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  28.85 
 
 
248 aa  63.2  0.000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.83 
 
 
225 aa  62.8  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  31.82 
 
 
227 aa  62.8  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.73 
 
 
225 aa  62  0.000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.87 
 
 
224 aa  62.8  0.000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  35.96 
 
 
224 aa  62.4  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.87 
 
 
228 aa  62.8  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  27.68 
 
 
228 aa  61.2  0.000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  38.24 
 
 
225 aa  60.5  0.000000007  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  26.79 
 
 
226 aa  60.5  0.000000007  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  38.24 
 
 
225 aa  60.5  0.000000007  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  32.08 
 
 
236 aa  60.5  0.000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  36.59 
 
 
225 aa  60.5  0.000000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  32.38 
 
 
241 aa  59.7  0.00000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  35.14 
 
 
226 aa  60.1  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  28.3 
 
 
226 aa  59.7  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_013132  Cpin_2386  transcriptional regulator, Crp/Fnr family  26.4 
 
 
230 aa  58.9  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0267635  normal  0.395563 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  24.43 
 
 
254 aa  59.3  0.00000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_008009  Acid345_1499  cyclic nucleotide-binding protein  25.64 
 
 
165 aa  58.9  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.191417  normal  0.714483 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  32.14 
 
 
224 aa  58.9  0.00000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  31.13 
 
 
236 aa  59.3  0.00000002  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.43 
 
 
225 aa  59.3  0.00000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  29.32 
 
 
226 aa  58.5  0.00000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  32.35 
 
 
224 aa  58.5  0.00000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  38.81 
 
 
224 aa  58.2  0.00000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  38.81 
 
 
224 aa  58.2  0.00000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_008740  Maqu_3081  CRP/FNR family transcriptional regulator  25.78 
 
 
249 aa  57.8  0.00000005  Marinobacter aquaeolei VT8  Bacteria  normal  0.0390484  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  29 
 
 
236 aa  57.4  0.00000006  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  37.97 
 
 
224 aa  57.4  0.00000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  27.5 
 
 
234 aa  57.4  0.00000006  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  27.12 
 
 
348 aa  57.4  0.00000007  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  29.07 
 
 
227 aa  57.4  0.00000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  36.49 
 
 
224 aa  57.4  0.00000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  26.4 
 
 
236 aa  57.4  0.00000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  32.38 
 
 
230 aa  57  0.00000008  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  27.68 
 
 
263 aa  57  0.00000009  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  41.79 
 
 
224 aa  57  0.00000009  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_009507  Swit_5204  CRP/FNR family transcriptional regulator  29.46 
 
 
261 aa  56.6  0.0000001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.26828 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  37.31 
 
 
224 aa  56.6  0.0000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  29 
 
 
236 aa  56.6  0.0000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  29.76 
 
 
227 aa  57  0.0000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.79 
 
 
229 aa  56.6  0.0000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  37.31 
 
 
224 aa  56.6  0.0000001  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  37.31 
 
 
224 aa  56.6  0.0000001  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  31.25 
 
 
214 aa  55.8  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  28.16 
 
 
246 aa  55.5  0.0000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  26.79 
 
 
230 aa  55.1  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  29.41 
 
 
563 aa  54.7  0.0000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_009441  Fjoh_2535  CRP/FNR family transcriptional regulator  25.76 
 
 
226 aa  53.9  0.0000006  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4086  putative transcriptional regulator, Crp/Fnr family  42.59 
 
 
209 aa  53.9  0.0000007  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0944516 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.42 
 
 
243 aa  53.9  0.0000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  31.63 
 
 
407 aa  53.9  0.0000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  32.99 
 
 
223 aa  53.9  0.0000007  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  25.62 
 
 
228 aa  53.5  0.0000008  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  26.45 
 
 
227 aa  53.5  0.0000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  24.81 
 
 
222 aa  53.5  0.0000008  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  34.29 
 
 
224 aa  53.9  0.0000008  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  29.2 
 
 
226 aa  53.5  0.000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  27.68 
 
 
231 aa  53.1  0.000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  36.84 
 
 
241 aa  53.5  0.000001  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  25.62 
 
 
227 aa  53.1  0.000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  32.65 
 
 
229 aa  53.5  0.000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  28 
 
 
228 aa  52.8  0.000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_002967  TDE2616  cyclic nucleotide-binding protein  33.33 
 
 
219 aa  52.4  0.000002  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  31.68 
 
 
238 aa  52.4  0.000002  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3161  cyclic nucleotide-binding protein  23.85 
 
 
230 aa  52.4  0.000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  25.89 
 
 
228 aa  52.8  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  29.03 
 
 
229 aa  52.8  0.000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4460  putative transcriptional regulator, Crp/Fnr family  31.13 
 
 
171 aa  52.4  0.000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  29.25 
 
 
254 aa  52.4  0.000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
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