More than 300 homologs were found in PanDaTox collection
for query gene Cfla_3052 on replicon NC_014151
Organism: Cellulomonas flavigena DSM 20109



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014151  Cfla_3052  extracellular solute-binding protein family 1  100 
 
 
427 aa  857    Cellulomonas flavigena DSM 20109  Bacteria  normal  0.854825  normal  0.208902 
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  74.49 
 
 
429 aa  605  9.999999999999999e-173  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  59.08 
 
 
427 aa  488  1e-137  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_013131  Caci_3587  extracellular solute-binding protein family 1  57.29 
 
 
441 aa  448  1e-125  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.935518  normal  0.988969 
 
 
-
 
NC_013131  Caci_0477  extracellular solute-binding protein family 1  54.96 
 
 
432 aa  418  9.999999999999999e-116  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.838392  normal 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  48.14 
 
 
433 aa  389  1e-107  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  47.29 
 
 
434 aa  386  1e-106  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_013174  Jden_2072  extracellular solute-binding protein family 1  44.32 
 
 
431 aa  372  1e-102  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.0000000238529  normal 
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  46.45 
 
 
428 aa  359  5e-98  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_013093  Amir_2404  extracellular solute-binding protein family 1  43.18 
 
 
424 aa  311  2e-83  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000132449  n/a   
 
 
-
 
NC_008578  Acel_2049  extracellular solute-binding protein  42.38 
 
 
435 aa  305  1.0000000000000001e-81  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0185  extracellular solute-binding protein family 1  36.74 
 
 
436 aa  276  5e-73  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.515223  n/a   
 
 
-
 
NC_013530  Xcel_2754  extracellular solute-binding protein family 1  39.44 
 
 
443 aa  260  4e-68  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  36.57 
 
 
495 aa  248  1e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  34.1 
 
 
427 aa  209  6e-53  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_009654  Mmwyl1_2762  extracellular solute-binding protein  31.93 
 
 
431 aa  187  3e-46  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2950  extracellular solute-binding protein  30.24 
 
 
435 aa  177  3e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.110397  normal 
 
 
-
 
NC_009485  BBta_3985  putative ABC sugar transporter (substrate binding protein)  30.35 
 
 
419 aa  171  3e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2696  extracellular solute-binding protein  31.22 
 
 
420 aa  168  2e-40  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.240659  n/a   
 
 
-
 
NC_012850  Rleg_1866  extracellular solute-binding protein family 1  31.44 
 
 
434 aa  167  2.9999999999999998e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1685  extracellular solute-binding protein family 1  30.12 
 
 
434 aa  160  6e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0614  extracellular solute-binding protein family 1  27.52 
 
 
435 aa  150  3e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1133  extracellular solute-binding protein family 1  28.71 
 
 
451 aa  139  7e-32  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1619  putative sugar-binding lipoprotein  30.79 
 
 
434 aa  132  9e-30  Thermobifida fusca YX  Bacteria  normal  0.195944  n/a   
 
 
-
 
NC_013411  GYMC61_2716  extracellular solute-binding protein family 1  26.88 
 
 
441 aa  128  2.0000000000000002e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_2345  extracellular solute-binding protein family 1  26.33 
 
 
424 aa  124  4e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.822896  normal  0.413258 
 
 
-
 
NC_011898  Ccel_0200  extracellular solute-binding protein family 1  26.09 
 
 
441 aa  120  3e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0296  hypothetical protein  27.2 
 
 
439 aa  120  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0944  extracellular solute-binding protein  31.72 
 
 
422 aa  120  7e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.544942  normal 
 
 
-
 
NC_009429  Rsph17025_3651  hypothetical protein  28.89 
 
 
437 aa  119  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.943877  normal  0.0762923 
 
 
-
 
NC_009620  Smed_4017  extracellular solute-binding protein  30.46 
 
 
435 aa  119  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1136  extracellular solute-binding protein family 1  26.47 
 
 
431 aa  117  3.9999999999999997e-25  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0621  extracellular solute-binding protein  26.23 
 
 
427 aa  115  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.178997  n/a   
 
 
-
 
NC_009664  Krad_0972  extracellular solute-binding protein family 1  31.58 
 
 
442 aa  115  2.0000000000000002e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0353052 
 
 
-
 
NC_009664  Krad_1105  extracellular solute-binding protein family 1  31.7 
 
 
442 aa  115  2.0000000000000002e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.314126  normal  0.258829 
 
 
-
 
NC_014165  Tbis_0069  extracellular solute-binding protein family 1  30.43 
 
 
448 aa  113  6e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_13140  extracellular solute-binding protein family 1  24.7 
 
 
424 aa  113  6e-24  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_23430  ABC-type sugar transport system, periplasmic component  26.13 
 
 
435 aa  112  1.0000000000000001e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.969599  normal 
 
 
-
 
NC_008541  Arth_0090  extracellular solute-binding protein  32.84 
 
 
441 aa  111  2.0000000000000002e-23  Arthrobacter sp. FB24  Bacteria  normal  0.214251  n/a   
 
 
-
 
NC_013172  Bfae_01550  ABC-type sugar transport system, periplasmic component  29.15 
 
 
438 aa  109  9.000000000000001e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007488  RSP_3941  ABC sugar transporter, periplasmic ligand binding protein  27.27 
 
 
436 aa  107  3e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.487085  n/a   
 
 
-
 
NC_009664  Krad_3573  extracellular solute-binding protein family 1  31.7 
 
 
441 aa  107  3e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.862573  normal  0.0197328 
 
 
-
 
NC_010001  Cphy_1529  extracellular solute-binding protein  26.07 
 
 
439 aa  108  3e-22  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1184  ABC transporter, substrate-binding protein  27.45 
 
 
413 aa  103  6e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  0.186568  n/a   
 
 
-
 
NC_011898  Ccel_1025  extracellular solute-binding protein family 1  24.54 
 
 
444 aa  103  6e-21  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000399953  n/a   
 
 
-
 
NC_008709  Ping_2008  ABC transporter extracellular solute-binding protein  28.72 
 
 
408 aa  103  7e-21  Psychromonas ingrahamii 37  Bacteria  normal  0.247518  normal 
 
 
-
 
NC_009078  BURPS1106A_A2818  carbohydrate ABC transporter periplasmic binding protein  27.89 
 
 
399 aa  102  1e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2327  extracellular solute-binding protein family 1  28.83 
 
 
424 aa  100  7e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.169538  normal 
 
 
-
 
NC_008061  Bcen_5201  extracellular solute-binding protein  30.38 
 
 
420 aa  97.4  5e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5658  extracellular solute-binding protein  30.38 
 
 
420 aa  97.4  5e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0866592  normal  0.356633 
 
 
-
 
NC_010515  Bcenmc03_4577  extracellular solute-binding protein  30.38 
 
 
419 aa  97.4  5e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00216886 
 
 
-
 
NC_012850  Rleg_2652  extracellular solute-binding protein family 1  27.76 
 
 
424 aa  97.1  6e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.142803  normal 
 
 
-
 
NC_012793  GWCH70_3155  extracellular solute-binding protein family 1  25.67 
 
 
434 aa  96.7  7e-19  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1301  MalE-type ABC sugar transport system periplasmic component  28.17 
 
 
441 aa  95.9  1e-18  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2351  extracellular solute-binding protein  28.91 
 
 
421 aa  93.2  8e-18  Burkholderia phymatum STM815  Bacteria  normal  0.576024  normal  0.167209 
 
 
-
 
NC_011988  Avi_5736  ABC transporter, substrate-binding protein  25 
 
 
410 aa  93.2  8e-18  Agrobacterium vitis S4  Bacteria  normal  0.214535  n/a   
 
 
-
 
NC_010676  Bphyt_4586  extracellular solute-binding protein family 1  29.6 
 
 
417 aa  93.2  8e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.947174 
 
 
-
 
NC_010552  BamMC406_5487  extracellular solute-binding protein  29.75 
 
 
419 aa  92.8  9e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  decreased coverage  0.0000866815 
 
 
-
 
NC_008391  Bamb_4932  extracellular solute-binding protein  29.75 
 
 
419 aa  92.8  1e-17  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0556288 
 
 
-
 
NC_013172  Bfae_27700  ABC-type sugar transport system, periplasmic component  23.44 
 
 
426 aa  91.7  2e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3304  extracellular solute-binding protein family 1  25.9 
 
 
431 aa  91.3  3e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3409  extracellular solute-binding protein  27.05 
 
 
451 aa  91.3  3e-17  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000000553575  n/a   
 
 
-
 
NC_008392  Bamb_6324  extracellular solute-binding protein  29.63 
 
 
412 aa  90.9  4e-17  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_09490  extracellular solute-binding protein family 1  24.85 
 
 
424 aa  90.9  4e-17  Halothermothrix orenii H 168  Bacteria  unclonable  2.48456e-16  n/a   
 
 
-
 
NC_011899  Hore_13200  extracellular solute-binding protein family 1  26.04 
 
 
424 aa  89.4  1e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_6024  extracellular solute-binding protein  29.26 
 
 
412 aa  88.6  2e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3264  extracellular solute-binding protein  28.65 
 
 
416 aa  88.6  2e-16  Salinispora tropica CNB-440  Bacteria  normal  normal  0.591163 
 
 
-
 
NC_011899  Hore_20520  extracellular solute-binding protein family 1  27.1 
 
 
417 aa  88.2  2e-16  Halothermothrix orenii H 168  Bacteria  normal  0.561553  n/a   
 
 
-
 
NC_010086  Bmul_3196  extracellular solute-binding protein  29.43 
 
 
419 aa  88.6  2e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.461238  normal  0.154514 
 
 
-
 
NC_008061  Bcen_4880  extracellular solute-binding protein  28.89 
 
 
412 aa  87  6e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3285  extracellular solute-binding protein  28.89 
 
 
412 aa  87  6e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8236  ABC-type sugar transport system periplasmic component-like protein  27.4 
 
 
434 aa  86.3  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.953199  normal  0.764848 
 
 
-
 
NC_011886  Achl_3169  extracellular solute-binding protein family 1  27.45 
 
 
445 aa  85.5  0.000000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.187022 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  32.82 
 
 
447 aa  85.5  0.000000000000002  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_013947  Snas_3251  extracellular solute-binding protein family 1  26.33 
 
 
428 aa  85.1  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.292164  normal  0.0559218 
 
 
-
 
NC_011898  Ccel_2115  extracellular solute-binding protein family 1  24.12 
 
 
432 aa  82.8  0.00000000000001  Clostridium cellulolyticum H10  Bacteria  normal  0.845793  n/a   
 
 
-
 
NC_014212  Mesil_2391  extracellular solute-binding protein family 1  25.66 
 
 
422 aa  82.8  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.436445  normal 
 
 
-
 
NC_009953  Sare_3494  extracellular solute-binding protein  27.63 
 
 
414 aa  82.4  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0194042 
 
 
-
 
NC_013526  Tter_1999  extracellular solute-binding protein family 1  25.37 
 
 
468 aa  80.9  0.00000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  26.41 
 
 
406 aa  80.9  0.00000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013595  Sros_7939  ABC transporter (substrate-binding protein)  24.37 
 
 
428 aa  79.3  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.50295  normal  0.560439 
 
 
-
 
NC_008541  Arth_3379  extracellular solute-binding protein  28.5 
 
 
445 aa  79  0.0000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0598  extracellular solute-binding protein family 1  24.9 
 
 
446 aa  79  0.0000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.764573  n/a   
 
 
-
 
NC_009718  Fnod_0626  extracellular solute-binding protein  26.54 
 
 
408 aa  78.2  0.0000000000002  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000892518  n/a   
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  26.46 
 
 
421 aa  78.2  0.0000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0616  extracellular solute-binding protein family 1  25.88 
 
 
432 aa  77.8  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1291  extracellular solute-binding protein family 1  25.68 
 
 
470 aa  78.2  0.0000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_2255  ABC-type sugar transport system periplasmic component-like protein  25.94 
 
 
440 aa  77.4  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.190437  normal  0.413243 
 
 
-
 
NC_013595  Sros_4889  ABC-type sugar transport system periplasmic component-like protein  32.2 
 
 
429 aa  77  0.0000000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.278868  normal  0.377169 
 
 
-
 
NC_009654  Mmwyl1_2016  extracellular solute-binding protein  25.08 
 
 
408 aa  77  0.0000000000006  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00148299  normal 
 
 
-
 
NC_013525  Tter_0208  extracellular solute-binding protein family 1  23.37 
 
 
454 aa  76.3  0.0000000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_1248  extracellular solute-binding protein family 1  26.09 
 
 
414 aa  76.3  0.000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.494424  normal  0.639356 
 
 
-
 
NC_011898  Ccel_3350  extracellular solute-binding protein family 1  28.5 
 
 
461 aa  75.9  0.000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  26.43 
 
 
433 aa  76.3  0.000000000001  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_010003  Pmob_1924  extracellular solute-binding protein  28.57 
 
 
415 aa  75.1  0.000000000002  Petrotoga mobilis SJ95  Bacteria  normal  0.121968  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  32.76 
 
 
419 aa  75.1  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013947  Snas_3121  extracellular solute-binding protein family 1  28.28 
 
 
445 aa  75.1  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00116931 
 
 
-
 
NC_012669  Bcav_0127  extracellular solute-binding protein family 1  26.8 
 
 
442 aa  75.1  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1174  extracellular solute-binding protein  23.96 
 
 
455 aa  74.7  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  0.401546 
 
 
-
 
NC_009523  RoseRS_0803  extracellular solute-binding protein  23.73 
 
 
435 aa  73.9  0.000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
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