Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3985 |
Symbol | |
ID | 5152205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 4192995 |
End bp | 4194254 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640558819 |
Product | putative ABC sugar transporter (substrate binding protein) |
Protein accession | YP_001239960 |
Protein GI | 148255375 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTGC TCGCGAAGCT GGGACTCGCC GCTGCCGCAT GCCTGATCGG GGCCAACGCC GCGAACGCCG ACACCACCGT CAAATGGCTG CACATCGAGG TCAATCCGGC GCAGGTCAAG ATCTGGGACG AGGTGGCCCG CGCCTATGAG GCGTCGCATC CGGGCGTGAA GATCGAGATG CAGTTCTTGG AGAACGAGGC CTACAAGGCC AAGCTGCCGA CCATTCTGCA ATCAAAGGAC CGGCCGAACA TCATCTACAG CTGGGCCGGC GGCGTACTGA AGGCGCAGAT CGAGGCGGGC GTCCTCGACG ACATCACCGA TCAGGTGAAG GGCTACAGCG ATAGCCTGAC GCCTGCGGCA CTTGCGGCAT TCACCGACGA TGGCCGCATC TACGGTCTGC CGATCGCGCT GTCGCAGGTC GGTTTCCTCT GCAACAAGGA GCTGATGGCC AAGGCCAAGA TCGATCCGGC CGCCATCAAG AGCTGGGACG ATCTGCTTGG CGCCGTGAAG ACGCTGAAGG CCGCGGGCGT GACCCCGATC GTGGTCGGCG GCGCAGACAA ATGGCCGCTG CACTTCTACT GGACGCACCT TGCGGTTCGC ATCGGTGGCA AAGCGGCATT CGATGCGGCG CTGCGCGGCG AGAATGGCGG CTTTGCCGGA GAGACCTTCG TCAAATCCGG CGAGCTGTTC AAGCAGCTCG TCGATCTGCA GCCGTTCCAG AACGGCTTTC TCGGCTTCAA GAACCCCCAG GCCGTTGGCT ATTTCGGCGA CGGCAAGGCG GCGATGACCC TTGCCATCAG CTCCGCCTAT CATCTGCAGC GGGCGCTCGC AGCCGACAAG ATCGGCTTGA GCGAGGATAA GCTCTGCTGG TTCGATTTCC CGGCCGTGGC CGGCGGCAAG GGGGCTCCGA CCGATACGCT CGGCGGCATC ACCGGCTGGC TCGTCACCAA GGGCTCGCCG AAGGAAGCAG TCGATTTCCT GAAGTATTTC ATTTCGAAGG ACGTGCAGAC GCGGTTGGCG GCCGGGAATT TCATCGTCCC AGTCGTGCAG GGCGCCGACG CCGGCCTCAA CAATGGCTTC ATGAAGCTGA TCGCGGCCAA CCTGGCGAAG TCGAACTATC ATCAGAACTT CTATGACCAG AGCCTTGGCC CCTCGGTCGG CCGCGTCGTC AACGATGTCT CGGCGGAGAT CGCGGGCGGC AGCATGAGTC CGCAGGACGC AGCCAAGGCG ATTGAAGCGG CCCGCAAACA GGGCAACTGA
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Protein sequence | MRLLAKLGLA AAACLIGANA ANADTTVKWL HIEVNPAQVK IWDEVARAYE ASHPGVKIEM QFLENEAYKA KLPTILQSKD RPNIIYSWAG GVLKAQIEAG VLDDITDQVK GYSDSLTPAA LAAFTDDGRI YGLPIALSQV GFLCNKELMA KAKIDPAAIK SWDDLLGAVK TLKAAGVTPI VVGGADKWPL HFYWTHLAVR IGGKAAFDAA LRGENGGFAG ETFVKSGELF KQLVDLQPFQ NGFLGFKNPQ AVGYFGDGKA AMTLAISSAY HLQRALAADK IGLSEDKLCW FDFPAVAGGK GAPTDTLGGI TGWLVTKGSP KEAVDFLKYF ISKDVQTRLA AGNFIVPVVQ GADAGLNNGF MKLIAANLAK SNYHQNFYDQ SLGPSVGRVV NDVSAEIAGG SMSPQDAAKA IEAARKQGN
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