Gene Sare_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3494 
Symbol 
ID5704765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4029680 
End bp4030924 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID641272921 
Productextracellular solute-binding protein 
Protein accessionYP_001538287 
Protein GI159039034 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0194042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGGG CGGCCGTCGC CGCGGTCGGG GCGCTCGCGT TGCTGTCGCC CGCCGCTTGC 
GGTGGTGCCG ACAGCGAGGC CGACCAGAAG GATGTGGAGG TCTTCACCTG GTGGGCCGAC
GGGGGTGAGA AGGCCGGACT GGACGGCCTG GTGGCGACCT TCGACGAGCA GTGTGACTAC
TCCTTCGTGA ACGGAGCGGT CGCCGGTGGC GCCGGATCGA ACGCCAAGCA GGTGCTGGCC
TCCCGGCTGC AACAGGGCGA TGCGCCGGAC ACCTTCCAGG CCCACGCCGG TGCCGAACTG
TCGGACTACA TCGCGGCCGG CCAGGTGGAG GATCTCAGCG CCCTGTACGA GGAATGGGGC
CTCACCGAGG CCCTTCCGTC AGGTCTGATC GACAACCTGA GCGTGGACGG CAAGATCTAC
TCGGTGCCGG CGAACATCCA CCGGGCCAAC GTCCTCTGGA CGAACAAGTC GGTGCTCAGC
GATGCCGGCG TCACGGCCGA ACCGACCACG ATGGCGGACT TCCTTGCCGC CCTCGAGACC
CTGAAGGCCA AGGGCGTCAG CGCGCCGCTC GCGATCGGCA AGGACTGGTC CCAGCTGATG
TTGCTGGAGG CGGTCCTGAT CAGTGACCTG GGCCCAGAGG GTTTCAACGG CCTGTGGAAC
GGCGGAACCG ACTGGAACAG CCCCGATGTC GCCAAGGGGC TGGAGAACTA CAAGCAGCTG
CTCAGCTACA CCAACGCGGA TCGGGACACC TACGACTGGA CCGACGCCGG GAAGCTCCTC
ATGGAGGGCA AGGCCGGCTT CTTCCTGATG GGGGACTGGG CTCCGAGTGA CTTCGAGGCC
AAGGGGTTCG CTGACTTCGG CCATGTCGCC TTTCCGGGTA ACGGGGACAC CTTCCAGTGG
CTCGCCGACT CCTTCGTGTT GCCCCAGGGC GCCAAGAACC CCGAGGGCAC CAAGTGCTGG
CTGAAGACCG TCGGCAGCGC CGAGGGACAG CAGGCGTTCA ACATCAAGAA GGGCTCCATC
CCCGCGCGTA CCGACGTCAC CGCGACCGAC TACCCCGCCT ACCAGCAGTC GGCCATCGAG
GCGTGGAAGA CTGCCACGCA GGTGCCGTCC TGCGCACACG GTGCCGCCTG CTCGCAGGGC
GCCGTTGAGG CGGCGAATTC CGCGATCGGC AAGTTCTCCA GCGACCAGGA CGCGGCAGGA
CTGCAGAAGG CGATGGCCGC CGCCGCTGCG CTCGGCAGGA ACTAG
 
Protein sequence
MRRAAVAAVG ALALLSPAAC GGADSEADQK DVEVFTWWAD GGEKAGLDGL VATFDEQCDY 
SFVNGAVAGG AGSNAKQVLA SRLQQGDAPD TFQAHAGAEL SDYIAAGQVE DLSALYEEWG
LTEALPSGLI DNLSVDGKIY SVPANIHRAN VLWTNKSVLS DAGVTAEPTT MADFLAALET
LKAKGVSAPL AIGKDWSQLM LLEAVLISDL GPEGFNGLWN GGTDWNSPDV AKGLENYKQL
LSYTNADRDT YDWTDAGKLL MEGKAGFFLM GDWAPSDFEA KGFADFGHVA FPGNGDTFQW
LADSFVLPQG AKNPEGTKCW LKTVGSAEGQ QAFNIKKGSI PARTDVTATD YPAYQQSAIE
AWKTATQVPS CAHGAACSQG AVEAANSAIG KFSSDQDAAG LQKAMAAAAA LGRN