| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3587 |
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| Symbol | |
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| ID | 8334940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4001584 |
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| End bp | 4002909 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956730 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003114333 |
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| Protein GI | 256392769 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.935518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.988969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGGA ATACGCGCAA CGTGATAGCC GTCGTGCTCG GTTTGAGCGC GGCACTGGCC
GCCGCCGGCT GTGCCGGCGG CAGCAGCAAC GGCGGAGGCG GCGGCAGCGG CAGCAGCGGC
GGCGGCGGTT CGCAAGGCGG CGGGCAGGTC AAGCTGACCG TCTGGCAGAA CTCGACCACC
GGTCCCGGTC AGCAGTTCTT CCTGACCGCC GCGAAGGACT ACCACGCGCA GCACCCGAAC
GTCACGATCA ACGTCCAGAC GATCCAGAAC GAGGATCTCG ACGGCAAGCT GCAGACCGCG
CTCAACGCGA ACGCCGCGCC GGACATCTTC CTGCAGCGCG GCGGCGGCAA GATGCAGGCG
ATGGTCACCG CCGGCCAGAT CCAGGAGCTG GATCTCTCGG CCACCGACAA GGCGAACGTC
GGCACGGCGG CGCTGGCCGC CGAATCGCTC GACGGCAAGG TCTACGCGAT GCCGATGGAC
ACCCAGCCGG AGGGCTTCTA CTACAGCAAA GACCTGTTCC AGCAGGCCGG CATCACCGCG
ACGCCGACGA CGATCGACGA GCTCGAGGCC GACGTGGCCA AGCTCAAGGC GATCAACGTC
TCGCCGATCG CGGTCGGCGC CAAGGACGCC TGGCCGGCGG CGCACTGGTA CTACAACTTC
GCCCTGCGCG AGTGCAGCCA GGCCACGATG ACCAGCACCG CCAAGTCGCT GAAGTTCAGC
GATCCCTGTT GGACCAAGGC CGGCGACGAC GTGGCCGCGT TCCTGAAGTC CGATCCCTTC
CAGAAGGGCT TCCTGACCAC CTCGGCGCAG CAGGGCGCGG GGTCCTCGGC GGGCCTGCTC
GCGAACCACA AGGCGGGCAT GGAACTCATG GGCAACTGGG ACCCCGGGGT GATCGCGAGC
CTGACCCCGG ACCAGAAGCC GCTGCCGGAC CTGGGCTGGT TCCCCTTCCC CGCCGTCGCC
GGCGGCCAGG GCGACCCGAC CGCCATCATG GGCGGCGCCG ACGGCTACTC GGTGTCGAAG
AAGGCGCCCA AGGAAGCCTT CCAGTTCCTG GAATTCCTGG CGACCAAGGA AGAGCAGGAG
GCCTACGCCA AGGCCTTCGA CGCGATCCCG GTCAACCCGG CGGCTCAGGA CGCCGTGACC
GACCCGTACA ACGTCTCGAC GCTGCAGGCG TTCAGCAAGG CCGCCTATGC GATGCAATAC
CTTGACACCC AGTTCGGCCA GAACGTCGGC AACGCGATGA ACACGGCCGT GGTGAGCCTG
ATGGCCGGCA AGGGCAGCGC GGCGAACATC GTCTCGGCGA CCAACAGCGC CGCCGCGAGA
GGCTGA
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| Protein sequence | MTRNTRNVIA VVLGLSAALA AAGCAGGSSN GGGGGSGSSG GGGSQGGGQV KLTVWQNSTT
GPGQQFFLTA AKDYHAQHPN VTINVQTIQN EDLDGKLQTA LNANAAPDIF LQRGGGKMQA
MVTAGQIQEL DLSATDKANV GTAALAAESL DGKVYAMPMD TQPEGFYYSK DLFQQAGITA
TPTTIDELEA DVAKLKAINV SPIAVGAKDA WPAAHWYYNF ALRECSQATM TSTAKSLKFS
DPCWTKAGDD VAAFLKSDPF QKGFLTTSAQ QGAGSSAGLL ANHKAGMELM GNWDPGVIAS
LTPDQKPLPD LGWFPFPAVA GGQGDPTAIM GGADGYSVSK KAPKEAFQFL EFLATKEEQE
AYAKAFDAIP VNPAAQDAVT DPYNVSTLQA FSKAAYAMQY LDTQFGQNVG NAMNTAVVSL
MAGKGSAANI VSATNSAAAR G
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