| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4577 |
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| Symbol | |
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| ID | 6127398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1566200 |
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| End bp | 1567459 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641651673 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001778206 |
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| Protein GI | 170736946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00216886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCATC GCCCCCTTCG CGTCGCCGCC CGCCTCGCGA CCGCCGCCGC CATCGCGTTC
GCCTCGTTCG GCGCTACGAC GCCCGCCGAT GCCGGCACGC TGACGATCAA CATCGCGTTC
AAGGGCGCGA GCCAGCGCGC GGTGTGGCAG TCGACGATCG AAGCGTTCCA CAAGGCCCAT
CCCGACATCG ACGTGAAACC GACCTTCGTC GACGAGGAAG CGTACAAGGT GCAGCTCCCC
GCGTGGCTCA CCACCGTCGC GCCGGACGTC GTGAACTGGC ACGCGGGCGA GCGGATGGCG
TACTACGCGA AGCGCGGGCT ATTCGAGGAC CTGAGCGGCG ACTGGTCGAA GAACGGCTGG
GACGCGATGT ACGCGTCGAC GCGCAGCGCG TCGTCCTATA ACGGCAAGCA GTACGCGGCG
CCGACCGTCT ACTACTCGTG GGGCCTCTTC TACCGCAAGG ACCTGTTCCG CAAGGTCGGC
ATCGCCGACG AACCGAAGAC CTGGGACCAG TTTCTCGACG CGTGCAAGAA GCTGAAGGCC
GCGGGCATCA CGCCGATCGC GATCGGCGGC CGCGACGCGT GGACGCTCGC CGGCTGGTTC
GACTATCTCG ACCTGCGCCT GAACGGCAAC GCGTTCCACC AGCAGCTGAT GGCCGGCGAC
GTGCCGTACA CCGACCCGCG CGTGAAGAAG GTCTACACGA CGTGGAAATC GCTGATCGAC
TCGGGCTACT TCATCGACAA CGCGCTGTCC TACGATCTCG ACGGCGCGCA GCCGTTCCTG
TTCCAGGGCA AGGCCGCGAT GATGCTGATG GGCACCTTCA TCGCGGCGGG TTTCCCGCCG
AACGTGAAGC CGGACATGGG CTATTACCGC TTCCCGATCA TCGACCCGAA GGTGCCGACC
GCCGAGGACG GCCCGGTCGA ATCGCTGCAC ATCCCGACCA AGGCGAAGAA CAAGGCCGAC
GCGCACACGT TCCTCGCGTT CGTCGAAACG CCCGAGATGG GCGCGAAGCT AGCCGAAGGG
CTCGGCTCGC TGTCGGCCAA CAGCAAGTCC CCCGAGCCGG CCGATCCGAT CTCGCGCATC
GGCTTCCGGA TCCTCGCCGA CACGAAGGGC GGCGTCGCGC AGTTCTACGA CCGCGACATG
ACCAAGGAAA TGGCCGACGA GGGGATGAAG GGGATGCAGC AGTTCCTCGC GAATCCCGCG
CAGCTCGATA CGGTGCTCGC GCAACTCGAA CAGACCCGCA AGCGGATCTA CAAGAAGTGA
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| Protein sequence | MTHRPLRVAA RLATAAAIAF ASFGATTPAD AGTLTINIAF KGASQRAVWQ STIEAFHKAH
PDIDVKPTFV DEEAYKVQLP AWLTTVAPDV VNWHAGERMA YYAKRGLFED LSGDWSKNGW
DAMYASTRSA SSYNGKQYAA PTVYYSWGLF YRKDLFRKVG IADEPKTWDQ FLDACKKLKA
AGITPIAIGG RDAWTLAGWF DYLDLRLNGN AFHQQLMAGD VPYTDPRVKK VYTTWKSLID
SGYFIDNALS YDLDGAQPFL FQGKAAMMLM GTFIAAGFPP NVKPDMGYYR FPIIDPKVPT
AEDGPVESLH IPTKAKNKAD AHTFLAFVET PEMGAKLAEG LGSLSANSKS PEPADPISRI
GFRILADTKG GVAQFYDRDM TKEMADEGMK GMQQFLANPA QLDTVLAQLE QTRKRIYKK
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