| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3409 |
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| Symbol | |
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| ID | 5743686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4172661 |
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| End bp | 4174016 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294515 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001560501 |
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| Protein GI | 160881533 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000553575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC GTGTTCTTAC GATACTCATG GCGATTACTT TAGTAATCTC ATTACTTGCA
GGATGCAGTG ACAAGAGTGC GAAAACAGAT AATGCTACGA AAGAGAATAA CAAAGCGGAA
GCTACGAAAG GGCCTACACA ATCACCGAAC TCAAGTTCTG ATAAAATAAC GTTAAAACTA
TTCTCTAATC TTCCGGATAG AAAGAATGGT CAAGGCTTAA TAGAACAGAT GATAATTGAC
GAATACACAA ATAAGAATCC TAATGTAACA ATTGAAGTTG AAGCATTGGA TGAAGAAGCG
TATAAAACGA AGTTCAGAGC GTACGCAATG AATGGTATGC CAGATGTTGT GAGTATCTGG
GGACAGCCAT CTTTCTTAGA TGAAGTTTTG GAAGCTGGAG TTTTAGCAGA ACTTAAAGAG
AGTGATTATG CAAACTATGG TTTTGTATCA GGTTCTCTAG AAGGATTTAA GAAGGATGGA
AAGTTATACG GTCTACCAAG AAATACAGAC GTTATGGCAT TTTATTATAA CGAGAAAATA
TTTAATGATA ACGGTTGGAA GGTTCCAAAT ACATTTGAAG AATTCTTAGA TCTAGCAAAA
CAGATAAAAG ATGCCGGTAT GATTCCGGTT GCAATGGACG GCGGCGATGG ATGGCCAATG
GCGATTTATT TAACAGATCT TTTAGTTAGA ATCAATGGGA ACTGTAGCGA ACTGATATCG
AAAGGGATTC GCAGCGGAGA TTTTTCAGAT CCTGTATTTA AAGAAGCAGC TGAGTTATTA
AGAAAATCTG CAGAAGTAGG AATGTTCCAG ACAGGTTACG ATTCTCAAGA TTATGGTACT
GCGATGAATT TATTTACCAA TGGACAATCC GCAATGTTTT ATATGGGAAG TTGGGAAGCT
TCCATGGCTT TAAATAAGGA TATTAGTGAA GATGTACGGT CAAATGTCAG AGTATTTACG
ATGCCAGCTT TAGCAAACGG AAAAGGAAAG CAAACAGATA TTGCTGCATG GAATGGTGGC
GGATATGCAG TTTCTGCAAA TTCAGAAGTG AAGGATGAGG CAATTAAATT CTTAAACTTC
ATGTATCAGC AGGATAAATT ATCTAAGTAT GGATGGGAAA ATGGGGTTGG TATGTCAGCA
CAGGATCAGT CGGCTTATAT GACTGGCAAT GAAACCATTC TTCAAAAACA GTTTACAGAT
ATCGTTAAGA ATGCAACAAG TGTATCCGGA ACACCATTTA ATGATTGCGG TACCTCTGCT
TTTAAAACAG CAATAGAGAG TGAAATTCAG AGTTTATCCA ATGGAACAAA ATCAGTAGAT
GAGTTCTACA AAGCGCTAGG AGAAGCATGT AAGTAA
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| Protein sequence | MKKRVLTILM AITLVISLLA GCSDKSAKTD NATKENNKAE ATKGPTQSPN SSSDKITLKL
FSNLPDRKNG QGLIEQMIID EYTNKNPNVT IEVEALDEEA YKTKFRAYAM NGMPDVVSIW
GQPSFLDEVL EAGVLAELKE SDYANYGFVS GSLEGFKKDG KLYGLPRNTD VMAFYYNEKI
FNDNGWKVPN TFEEFLDLAK QIKDAGMIPV AMDGGDGWPM AIYLTDLLVR INGNCSELIS
KGIRSGDFSD PVFKEAAELL RKSAEVGMFQ TGYDSQDYGT AMNLFTNGQS AMFYMGSWEA
SMALNKDISE DVRSNVRVFT MPALANGKGK QTDIAAWNGG GYAVSANSEV KDEAIKFLNF
MYQQDKLSKY GWENGVGMSA QDQSAYMTGN ETILQKQFTD IVKNATSVSG TPFNDCGTSA
FKTAIESEIQ SLSNGTKSVD EFYKALGEAC K
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