| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_23430 |
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| Symbol | |
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| ID | 8387667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2531014 |
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| End bp | 2532321 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976394 |
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| Product | ABC-type sugar transport system, periplasmic component |
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| Protein accession | YP_003134176 |
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| Protein GI | 257056344 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.969599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGG GTACGAGACG TACGGCGTTG CTCGCGGCGG GCACCGCCGC AGTCCTGGCC
TTAACCGCCG CATGCGGGTC CGGTGGACCG AGCAGGACGG AACCGAGCGC GTGGGCTCTG
ACGGGCGGTG ACGAACAGAC CATCCGTAGC TCCTTCGAAG CCTGGAACCA AAGCAACCCC
GACAACGCGA TCAACGTCGA TTTCTTCGCC AACGACGCCT ACAAACAGAA GATCCGCACG
GCCATCGGCG CCGGGGACGC ACCCACCCTC ATCTTCGGTT GGGGCGGTGG AACGTTGCGG
TCCTGGGTGA GCGCGGACAA GGTCGTGCCC CTGTCGGAAC TCGTCGAGGA CCCGGCGACG
CTCACCGACC GGTTCCTGCC CTCGGTGCTC GACACGGGTG TCGTCGACGG GGAGACCTAC
GCGTTGCCGA ACAACGGCAT GCAGCCTGTC CTGTTGTACT ACAACAAGAA GCTGTTCGAC
CGGATCGACG CCCAGCCGCC AAAGACCTGG GACGAACTGA TGGACCTCGT GCCACGGTTC
CGCGCGGAGG GCATCGCGCC GCTGGCGATG GGCGGACAGA GCAAGTGGCC ACAGCTCATG
TGGCTGGAGT ACCTGGTCGA CCGGATCGGC GGACCGGAGG TGTTCGACGC GATCGCGGCC
AACGAACCGG GCGCATGGTC GCACCCGGCG GTGAAACGGG CCGGGGAGAT GATCCGGGAG
CTCGTCGAGG CGGGTGGGTT CGTCGACGGA TACAACTCGA TCGCCGCCGA CAGCGGGGCC
GACGCGGCGT TGCTCTACAC CGACAAGGCC GCGATGTACC TGATGGGCTC GTGGGCGTAT
CCGAGCATCA TGGACTCCGC CCCACAGTTC ATCCGGGACG GACACCTCGG ATACACGACG
TTCCCCACCG TGGACGACGG TGAGGGCGAT CCCGCCAACA TCGTCGGCAA CCCGGCGAAC
TACTGGGCGA TCAGCGCGGA CGCCACGGAA AAGCAGCAGG ACGCGGCTGT CGCCTACCTC
ACCGACGGGA TGTTCAACGA CGACTACGTC GACACGCTGC TGGACAACGG GTCCGTGCCG
CCGCTGAAGG GCATCGAGGA CCGGATCTCC GACACGGACG ACCCCGAATA CCTGTCGTTC
GTGTACTCGT TGGCCAGTGA GGCACCCAAT TTCGAGCTGT CGTGGGACCA GGCGTTGTCT
CCCAGTCAGG CGGACGCGCT GCTGACCAAC CTGGAGCAGT TGTTCACGGG CCAGAAGTCG
CCTGAGGAAT TCTGCGCCGC CATGGACTCC ACCATCGAAC AGAAGTGA
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| Protein sequence | MALGTRRTAL LAAGTAAVLA LTAACGSGGP SRTEPSAWAL TGGDEQTIRS SFEAWNQSNP
DNAINVDFFA NDAYKQKIRT AIGAGDAPTL IFGWGGGTLR SWVSADKVVP LSELVEDPAT
LTDRFLPSVL DTGVVDGETY ALPNNGMQPV LLYYNKKLFD RIDAQPPKTW DELMDLVPRF
RAEGIAPLAM GGQSKWPQLM WLEYLVDRIG GPEVFDAIAA NEPGAWSHPA VKRAGEMIRE
LVEAGGFVDG YNSIAADSGA DAALLYTDKA AMYLMGSWAY PSIMDSAPQF IRDGHLGYTT
FPTVDDGEGD PANIVGNPAN YWAISADATE KQQDAAVAYL TDGMFNDDYV DTLLDNGSVP
PLKGIEDRIS DTDDPEYLSF VYSLASEAPN FELSWDQALS PSQADALLTN LEQLFTGQKS
PEEFCAAMDS TIEQK
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